RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 C9JCJ5 164 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 M0QZ92 97 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 SLC16A4O15374 487 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 CIAO1O76071 339 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 OCM2P0CE71 109 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 CA5AP35218 305 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 NKX2-5P52952 324 aaPredicted RBP0.98□□□□□ -2.25
CD44-215ENST00000525241 MAGOHP61326 146 aaKnown RBP0.98□□□□□ -2.25
CD44-215ENST00000525241 TNFAIP6P98066 277 aaPredicted RBP0.98□□□□□ -2.25
CD44-215ENST00000525241 PPP1R1AQ13522 171 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 JOSD1Q15040 202 aaPredicted RBP0.98□□□□□ -2.25
CD44-215ENST00000525241 IMPG1Q17R60 797 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 PLPPR5Q32ZL2 321 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 SAPCD1Q5SSQ6 148 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 C1orf194Q5T5A4 169 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 SBSNQ6UWP8 590 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 UNQ6190/PRO20217Q6UXQ8 127 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 ALKAL1Q6UXT8 129 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 ZNF550Q7Z398 422 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 C10orf67Q8IYJ2 551 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 TMEM86BQ8N661 226 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 OR1M1Q8NGA1 313 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 C12orf43Q96C57 262 aaKnown RBP0.98□□□□□ -2.25
CD44-215ENST00000525241 OPTNQ96CV9 577 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 DOHHQ9BU89 302 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 TMEM109Q9BVC6 243 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 USE1Q9NZ43 259 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 POLR1DQ9Y2S0 133 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 COQ4Q9Y3A0 265 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 CCDC88AQ3V6T2 1871 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 ZNF106Q9H2Y7 1883 aaKnown RBP0.98□□□□□ -2.25
CD44-215ENST00000525241 RYR3Q15413 4870 aa0.98□□□□□ -2.25
CD44-215ENST00000525241 DNHD1Q96M86 4753 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 FREM1Q5H8C1 2179 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 C2CD3Q4AC94 2353 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 LRRN3E7EW58 273 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 APOMO95445 188 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 HLA-DQB2P05538 268 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 SERPINA7P05543 415 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 IL3P08700 152 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 DDTP30046 118 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 G6PCP35575 357 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 AKR1C3P42330 323 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 REG1BP48304 166 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 BLVRAP53004 296 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 FXYD7P58549 80 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 TAS2R20P59543 309 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 TPI1P60174 286 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 MYL6P60660 151 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 RAB5BP61020 215 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 PTRHD1Q6GMV3 140 aaKnown RBP0.97□□□□□ -2.25
CD44-215ENST00000525241 TNFAIP8L2Q6P589 184 aaPredicted RBP0.97□□□□□ -2.25
CD44-215ENST00000525241 NAA40Q86UY6 237 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 JOSD2Q8TAC2 188 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 PIGXQ8TBF5 258 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 SLC7A6Q92536 515 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 RAB8BQ92930 207 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 IMMP2LQ96T52 175 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 UCK1Q9HA47 277 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 HES4Q9HCC6 221 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 HRASLSQ9HDD0 168 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 DKKL1Q9UK85 242 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 SOX21Q9Y651 276 aaPredicted RBP0.97□□□□□ -2.25
CD44-215ENST00000525241 RYR2Q92736 4967 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 MYH7BA7E2Y1 1941 aa0.97□□□□□ -2.25
CD44-215ENST00000525241 ZFYVE26Q68DK2 2539 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 MAP1BP46821 2468 aaKnown RBP0.96□□□□□ -2.26
CD44-215ENST00000525241 SETBP1Q9Y6X0 1596 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 IGKV2-40A0A087WW87 121 aaPredicted RBP0.96□□□□□ -2.26
CD44-215ENST00000525241 MEIKINA0A087WXM9 373 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.96□□□□□ -2.26
CD44-215ENST00000525241 IGHV1-18A0A0C4DH31 117 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 IGKV3D-7A0A0C4DH55 119 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 IGKV3OR2-268A0A0C4DH90 116 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 C5orf49A4QMS7 147 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 HMSDA8MTL9 139 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 EVPLLA8MZ36 301 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 F8W036 122 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 PFDN6O15212 129 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 TGOLN2O43493 480 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 E2F6O75461 281 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 IFNA5P01569 189 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 IGKV2D-40P01614 121 aaPredicted RBP0.96□□□□□ -2.26
CD44-215ENST00000525241 ISG15P05161 165 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 SERPINA6P08185 405 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 DEFA4P12838 97 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 NAA20P61599 178 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 LRRC75BQ2VPJ9 315 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 ZNF705AQ6ZN79 300 aaPredicted RBP0.96□□□□□ -2.26
CD44-215ENST00000525241 FP248Q71RG6 208 aaPredicted RBP0.96□□□□□ -2.26
CD44-215ENST00000525241 DEFB125Q8N687 156 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 UBL4BQ8N7F7 174 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 SGMS2Q8NHU3 365 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 ANKRD36BP1Q96IX9 119 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 CCL13Q99616 98 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 DRC3Q9H069 523 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 OR51I1Q9H343 314 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 C3orf18Q9UK00 162 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 ANAPC10Q9UM13 185 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms