RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 MRASO14807 208 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 GNG7O60262 68 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 APOMO95445 188 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 ZNF806P0C7X5 589 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 MUC1P15941 1255 aaPredicted RBP3.34□□□□□ -1.87
CD44-213ENST00000525209 PPP1CCP36873 323 aaKnown RBP3.34□□□□□ -1.87
CD44-213ENST00000525209 RPL35P42766 123 aaKnown RBP3.34□□□□□ -1.87
CD44-213ENST00000525209 TAS2R30P59541 319 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 HERVK_113P63121 156 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 MRPS10P82664 201 aaKnown RBP3.34□□□□□ -1.87
CD44-213ENST00000525209 HIST1H1AQ02539 215 aaPredicted RBP3.34□□□□□ -1.87
CD44-213ENST00000525209 TWIST1Q15672 202 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 CST6Q15828 149 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 LINC00303Q3SY05 128 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 OCIAD2Q56VL3 154 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 AWAT2Q6E213 333 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 C19orf48Q6RUI8 117 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 SCIMPQ6UWF3 145 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 IL34Q6ZMJ4 242 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 BAP18Q8IXM2 172 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 ZNF664Q8N3J9 261 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 YIPF7Q8N8F6 280 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 TMEM229BQ8NBD8 167 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 ORAOV1Q8WV07 137 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 FAM104AQ969W3 186 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 IGF2BP2-AS1Q96M15 143 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 C18orf15Q96N68 181 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 YPEL4Q96NS1 127 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 NDFIP1Q9BT67 221 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 PAXXQ9BUH6 204 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 ZNF436Q9C0F3 470 aaPredicted RBP3.34□□□□□ -1.87
CD44-213ENST00000525209 OR2H1Q9GZK4 316 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 YIPF3Q9GZM5 350 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 OR2D2Q9H210 308 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 JPT2Q9H910 190 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 NIT2Q9NQR4 276 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 LAMTOR2Q9Y2Q5 125 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 PYGO1Q9Y3Y4 419 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 FLVCR1Q9Y5Y0 555 aa3.34□□□□□ -1.87
CD44-213ENST00000525209 CENPFP49454 3210 aa3.34□□□□□ -1.88
CD44-213ENST00000525209 UQCRHLA0A096LP55 91 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 IGHV1-69-2A0A0G2JMI3 117 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 TMEM269A0A1B0GVZ9 245 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 C9JAW5 83 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 F6UZH7 168 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 LGALS9O00182 355 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 SOCS2O14508 198 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 GGCTO75223 188 aaKnown RBP3.33□□□□□ -1.88
CD44-213ENST00000525209 OR2H2O95918 312 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 IFNA7P01567 189 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 UQCRHP07919 91 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 SCTP09683 121 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 SCGB1C2P0DMR2 95 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 ZNF30P17039 623 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 PPIBP23284 216 aaKnown RBP3.33□□□□□ -1.88
CD44-213ENST00000525209 CMPK1P30085 196 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 INPP1P49441 399 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 AKR1D1P51857 326 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 DEFA3P59666 94 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 PPP1CAP62136 330 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 NCS1P62166 190 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 CAV1Q03135 178 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 MMDQ15546 238 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 OR8G1Q15617 311 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 RSPO1Q2MKA7 263 aaPredicted RBP3.33□□□□□ -1.88
CD44-213ENST00000525209 ORMDL2Q53FV1 153 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 FAM182AQ5T1J6 154 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 C9orf57Q5W0N0 161 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 C2orf66Q6UXQ4 117 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 UNQ9165/PRO28630Q6UXU0 137 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 MDP1Q86V88 176 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 ZNF584Q8IVC4 421 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 PDZD9Q8IXQ8 264 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 OR5W2Q8NH69 310 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 SCGB1C1Q8TD33 95 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 NMNAT3Q96T66 252 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 CHCHD5Q9BSY4 110 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 THTPAQ9BU02 230 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 C1QTNF4Q9BXJ3 329 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 SMIM3Q9BZL3 60 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 COMMD5Q9GZQ3 224 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 LPAR5Q9H1C0 372 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 GTSF1LQ9H1H1 148 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 KCNIP2Q9NS61 270 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 FAIMQ9NVQ4 179 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 DHRS4-AS1Q9P1J3 65 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 LAMTOR3Q9UHA4 124 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 PROCRQ9UNN8 238 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 HIGD1AQ9Y241 93 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 COQ4Q9Y3A0 265 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 MED31Q9Y3C7 131 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 IBTKQ9P2D0 1353 aaPredicted RBP3.33□□□□□ -1.88
CD44-213ENST00000525209 ZNF609O15014 1411 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 PSME4Q14997 1843 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 CDK5RAP2Q96SN8 1893 aa3.33□□□□□ -1.88
CD44-213ENST00000525209 MYH13Q9UKX3 1938 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 A0A0X1KG70 313 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 ZNF705GA8MUZ8 300 aaPredicted RBP3.32□□□□□ -1.88
CD44-213ENST00000525209 C4orf51C9J302 202 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 M0R381 172 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms