RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	ESD	P10768	282 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	IFI30	P13284	250 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	CXCL2	P19875	107 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	EIF2B2	P49770	351 aa	Known RBP	3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	SLC25A1	P53007	311 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	TCTA	P57738	103 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	RBX1	P62877	108 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	IFITM3	Q01628	133 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	C1D	Q13901	141 aa	Known RBP	3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	KCNJ8	Q15842	424 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	GSG1	Q2KHT4	349 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356		Q499Y3	187 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	CASC10	Q5T4H9	136 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	RSBN1	Q5VWQ0	802 aa	Predicted RBP	3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	SPATA31B1P	Q5VZV4	182 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	ELP2	Q6IA86	826 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	STRADA	Q7RTN6	431 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	C6orf120	Q7Z4R8	191 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	DHFR2	Q86XF0	187 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	C11orf53	Q8IXP5	236 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	IFT20	Q8IY31	132 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356		Q8N377	158 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	OR10G9	Q8NGN4	311 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	RXFP4	Q8TDU9	374 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	C7orf33	Q8WU49	177 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	OR52B2	Q96RD2	323 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	PRSS27	Q9BQR3	290 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	SAMD10	Q9BYL1	202 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	SLC25A31	Q9H0C2	315 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	SPNS1	Q9H2V7	528 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	PDF	Q9HBH1	243 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	UBQLN4	Q9NRR5	601 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	RBM12B-AS1	Q9P1G2	102 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	PCYOX1	Q9UHG3	505 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	GLS2	Q9UI32	602 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	BTRC	Q9Y297	605 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	YTHDF2	Q9Y5A9	579 aa	Known RBP	3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	PRSS21	Q9Y6M0	314 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	TMEM56-RWDD3	S4R434	201 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	ANKRD36	A6QL64	1941 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	MPDZ	O75970	2070 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	DOCK4	Q8N1I0	1966 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	NCOA6	Q14686	2063 aa	Predicted RBP	3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	ANKRD12	Q6UB98	2062 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	HIVEP2	P31629	2446 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356		A0A0G2JN53	185 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	PQLC2L	A1A4F0	135 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	PGP	A6NDG6	321 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	GPR31	O00270	319 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	UPK1A	O00322	258 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	MANBA	O00462	879 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	FFAR1	O14842	300 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	ARPC5	O15511	151 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	MED6	O75586	246 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	GCM2	O75603	506 aa	Predicted RBP	3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	CCNK	O75909	580 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	ATG12	O94817	140 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	CA2	P00918	260 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	OR13C7	P0DN81	318 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	APLNR	P35414	380 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	CDKN2B	P42772	138 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	CA7	P43166	264 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	UBE2N	P61088	152 aa	Known RBP	3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	ELF3	P78545	371 aa	Predicted RBP	3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	TEX36	Q5VZQ5	186 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	OR13C6P	Q8NH95	151 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	JOSD2	Q8TAC2	188 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	NAT14	Q8WUY8	206 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	PSMF1	Q92530	271 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	COX14	Q96I36	57 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	RNF157	Q96PX1	679 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	OR52E6	Q96RD3	313 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	TMEM243	Q9BU79	118 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	EBPL	Q9BY08	206 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	ZNF717	Q9BY31	904 aa	Predicted RBP	3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	ALX4	Q9H161	411 aa	Predicted RBP	3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	OR51I2	Q9H344	312 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	IDI2-AS1	Q9NZ38	188 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	RWDD2A	Q9UIY3	292 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	UTP11	Q9Y3A2	253 aa	Known RBP	3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	WSB1	Q9Y6I7	421 aa		3.07	□□□□□ -1.92
PCM1-223	ENST00000524356	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	3.07	□□□□□ -1.92	2e-7	■■□□□ 11.9
PCM1-223	ENST00000524356	IGHV6-1	A0A0B4J1U7	121 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356		A0A0J9YXY3	114 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	SMIM31	A0A1B0GVY4	71 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	NKX2-6	A6NCS4	301 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	EEF1E1-BLOC1S5	C9J1V9	151 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	AGRN	O00468	2067 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	PEX7	O00628	323 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	ARID1A	O14497	2285 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	BHLHE40	O14503	412 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	TXNDC9	O14530	226 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	EEF1E1	O43324	174 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	OR2A4	O95047	310 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	TTR	P02766	147 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	BGLAP	P02818	100 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	ATP5G1	P05496	136 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	OR4A8	P0C604	315 aa		3.06	□□□□□ -1.92
PCM1-223	ENST00000524356	CECR9	P0C854	216 aa		3.06	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms