RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 NDUFS8O00217 210 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 COX7A2P2O60397 106 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 MPDZO75970 2070 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 SNAP29O95721 258 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 IGF2P01344 180 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 SPTA1P02549 2419 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 OPN1SWP03999 348 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 HMGN1P05114 100 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 S100A9P06702 114 aaKnown RBP2.04□□□□□ -2.08
SKP1-212ENST00000523966 RPS4Y1P22090 263 aaKnown RBP2.04□□□□□ -2.08
SKP1-212ENST00000523966 FKBP2P26885 142 aaKnown RBP2.04□□□□□ -2.08
SKP1-212ENST00000523966 IL12BP29460 328 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 DNASE1L1P49184 302 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 DAPP51397 102 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 EMP2P54851 167 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 TAS2R41P59536 307 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 GABARAPL2P60520 117 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 CDC42P60953 191 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 BTG2P78543 158 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 MEF2CQ06413 473 aaPredicted RBP2.04□□□□□ -2.08
SKP1-212ENST00000523966 ZNF141Q15928 474 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 RPL13AP3Q6NVV1 102 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 ZNF773Q6PK81 442 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 FA2HQ7L5A8 372 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 GALNT10Q86SR1 603 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 GPR32P1Q8NGA4 272 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 OR5D16Q8NGK9 328 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 PIGXQ8TBF5 258 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 GNPDA2Q8TDQ7 276 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 PIEZO1Q92508 2521 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 DGCR14Q96DF8 476 aaKnown RBP2.04□□□□□ -2.08
SKP1-212ENST00000523966 ADTRPQ96IZ2 230 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 PITX2Q99697 317 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 ZNF649Q9BS31 505 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 DDA1Q9BW61 102 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 ULBP3Q9BZM4 244 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 SLC19A3Q9BZV2 496 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 OR8D2Q9GZM6 311 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 NDEL1Q9GZM8 345 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 SND1-IT1Q9HBX3 110 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 ACOT13Q9NPJ3 140 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 DIABLOQ9NR28 239 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 BAIAP2Q9UQB8 552 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 ZNF443Q9Y2A4 671 aaPredicted RBP2.04□□□□□ -2.08
SKP1-212ENST00000523966 MED31Q9Y3C7 131 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 TRAPPC1Q9Y5R8 145 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 U3KQA8 63 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 SPTBN5Q9NRC6 3674 aaKnown RBP2.04□□□□□ -2.08
SKP1-212ENST00000523966 TPRP12270 2363 aaKnown RBP2.03□□□□□ -2.08
SKP1-212ENST00000523966 DNAJC13O75165 2243 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 KIR2DS1A0A191URI9 304 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 LOC389332A0A1B0GUA5 103 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 A0A1W2PQD3 144 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 C21orf140B9A014 251 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 TP53I11O14683 189 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 FFAR1O14842 300 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 CHP2O43745 196 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 IGLV6-57P01721 117 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 C1QCP02747 245 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 CRHBPP24387 322 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 CTBP2P56545 445 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 SNRPGP62308 76 aaKnown RBP2.03□□□□□ -2.08
SKP1-212ENST00000523966 FMODQ06828 376 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 TSPAN31Q12999 210 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 C1DQ13901 141 aaKnown RBP2.03□□□□□ -2.08
SKP1-212ENST00000523966 EBPQ15125 230 aaKnown RBP2.03□□□□□ -2.08
SKP1-212ENST00000523966 SSX1Q16384 188 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 C5orf46Q6UWT4 87 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 RASSF6Q6ZTQ3 369 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 LINC00596Q86U02 117 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 HS3ST5Q8IZT8 346 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 SYS1Q8N2H4 156 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 CLDN22Q8N7P3 220 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 OR52L1Q8NGH7 329 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 OR2Y1Q8NGV0 311 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 TEX47Q8TBZ9 253 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 TMEM239Q8WW34 195 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 ITLN2Q8WWU7 325 aaPredicted RBP2.03□□□□□ -2.08
SKP1-212ENST00000523966 TSLPQ969D9 159 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 TVP23CQ96ET8 276 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 YPEL4Q96NS1 127 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 SPACA5Q96QH8 159 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 PLA2G12AQ9BZM1 189 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 DUSP21Q9H596 190 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 IL20Q9NYY1 176 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 UBAP1Q9NZ09 502 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 KLF13Q9Y2Y9 288 aaPredicted RBP2.03□□□□□ -2.08
SKP1-212ENST00000523966 SVILO95425 2214 aa2.03□□□□□ -2.08
SKP1-212ENST00000523966 TNRC6BQ9UPQ9 1833 aaKnown RBP2.03□□□□□ -2.09
SKP1-212ENST00000523966 ZFHX2Q9C0A1 2572 aaPredicted RBP2.03□□□□□ -2.09
SKP1-212ENST00000523966 APC2O95996 2303 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 RTTNQ86VV8 2226 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 DOCK10Q96BY6 2186 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 A0A087WUJ7 227 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 A0A087WUU8 490 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 A0A1B0GWA3 101 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 A0A1B0GX12 115 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 CCDC160A6NGH7 325 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 CLDN24A6NM45 220 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 CPSF4LA6NMK7 179 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms