RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 SCP2D1Q9UJQ7 156 aa9.74□□□□□ -0.85
CCNC-216ENST00000523961 C14orf166Q9Y224 244 aaKnown RBP9.74□□□□□ -0.85
CCNC-216ENST00000523961 H0Y980 276 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 I3L521 148 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 SERPINE2P07093 398 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 APELAP0DMC3 54 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 RPA2P15927 270 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 G6PCP35575 357 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 KLF9Q13886 244 aaPredicted RBP9.73□□□□□ -0.85
CCNC-216ENST00000523961 DEFB136Q30KP8 78 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 MRPL41Q8IXM3 137 aaKnown RBP9.73□□□□□ -0.85
CCNC-216ENST00000523961 LINC00482Q8N8I6 264 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 ADAD2Q8NCV1 583 aaKnown RBP9.73□□□□□ -0.85
CCNC-216ENST00000523961 DEDD2Q8WXF8 326 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 MRGPRFQ96AM1 343 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 SCGB3A2Q96PL1 93 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 FYTTD1Q96QD9 318 aaKnown RBP9.73□□□□□ -0.85
CCNC-216ENST00000523961 COMMD5Q9GZQ3 224 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 SRRQ9GZT4 340 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 MCUBQ9NWR8 336 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 COA4Q9NYJ1 87 aa9.73□□□□□ -0.85
CCNC-216ENST00000523961 NOTCH3Q9UM47 2321 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 TRAV3A0A0B4J244 114 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 A0A0G2JLM5 398 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 C3orf85A0A1B0GTC6 90 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 HMX3A6NHT5 357 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 TEX22C9J3V5 150 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 B3GALNT1O75752 331 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 SNAPC5O75971 98 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 TTC9CQ8N5M4 171 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 GDPD1Q8N9F7 314 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 OR11H1Q8NG94 326 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 RCC1LQ96I51 464 aaKnown RBP9.72□□□□□ -0.85
CCNC-216ENST00000523961 DUX3Q96PT4 197 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 OR5B12Q96R08 314 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 TSC22D3Q99576 134 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 GPR132Q9UNW8 380 aa9.72□□□□□ -0.85
CCNC-216ENST00000523961 TEX13DA0A0J9YY54 714 aaPredicted RBP9.71□□□□□ -0.86
CCNC-216ENST00000523961 C13orf42A0A1B0GVH6 325 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 A6NHS1 94 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 NPIPB5A8MRT5 1133 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 E7EUB6 86 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 ATG12O94817 140 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 DUS4LO95620 317 aaKnown RBP9.71□□□□□ -0.86
CCNC-216ENST00000523961 LGALS1P09382 135 aaKnown RBP9.71□□□□□ -0.86
CCNC-216ENST00000523961 OR2B8PP59922 312 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 ZNF616Q08AN1 781 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 FHL3Q13643 280 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 SAMD5Q5TGI4 173 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 THOC7Q6I9Y2 204 aaKnown RBP9.71□□□□□ -0.86
CCNC-216ENST00000523961 H2BFWTQ7Z2G1 175 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 OR1N2Q8NGR9 330 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 DPF1Q92782 380 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 SEC22AQ96IW7 307 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 USMG5Q96IX5 58 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 TP53RKQ96S44 253 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 SRSF8Q9BRL6 282 aaKnown RBP9.71□□□□□ -0.86
CCNC-216ENST00000523961 RTBDNQ9BSG5 229 aaPredicted RBP9.71□□□□□ -0.86
CCNC-216ENST00000523961 C5orf66Q9H5L9 145 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 FKBP11Q9NYL4 201 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 ZNF257Q9Y2Q1 563 aa9.71□□□□□ -0.86
CCNC-216ENST00000523961 A0A1B0GW64 132 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 G3V4G9 280 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 DHFRP00374 187 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 IGKV1-39P01597 117 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 IGHV3-11P01762 117 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 IGKV1D-39P04432 117 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 OR8U8P0C7N1 319 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 MYOD1P15172 320 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 UCP1P25874 307 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 INPP1P49441 399 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 RAB25P57735 213 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 ZNF45Q02386 682 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 TRIM16LQ309B1 348 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 OXLD1Q5BKU9 147 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 TRIQKQ629K1 86 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 ZNF57Q68EA5 555 aaPredicted RBP9.7□□□□□ -0.86
CCNC-216ENST00000523961 OR1L8Q8NGR8 309 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 MCRIP2Q9BUT9 160 aaKnown RBP9.7□□□□□ -0.86
CCNC-216ENST00000523961 QTRT1Q9BXR0 403 aaKnown RBP9.7□□□□□ -0.86
CCNC-216ENST00000523961 GPR61Q9BZJ8 451 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 PRNDQ9UKY0 176 aa9.7□□□□□ -0.86
CCNC-216ENST00000523961 TRBV9A0A0B4J1U6 114 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 CGB1A6NKQ9 187 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 FAM223BA6NKX1 122 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 HSPB1P04792 205 aaKnown RBP9.69□□□□□ -0.86
CCNC-216ENST00000523961 CRYGCP07315 174 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 TRAPPC2P0DI81 140 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 TRAPPC2BP0DI82 140 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 AREGP15514 252 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 IGLL1P15814 213 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 PSMB6P28072 239 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 RHOGP84095 191 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 SP6Q3SY56 376 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 HSD17B13Q7Z5P4 300 aaPredicted RBP9.69□□□□□ -0.86
CCNC-216ENST00000523961 C1QL4Q86Z23 238 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 FAM223AQ8IWN6 122 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 OR5B3Q8NH48 314 aa9.69□□□□□ -0.86
CCNC-216ENST00000523961 ALX4Q9H161 411 aaPredicted RBP9.69□□□□□ -0.86
CCNC-216ENST00000523961 NAA60Q9H7X0 242 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms