RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PRELID3BQ9Y3B1 194 aa8.48□□□□□ -1.05
SDCBP-211ENST00000523441 AK6Q9Y3D8 172 aaKnown RBP8.48□□□□□ -1.05
SDCBP-211ENST00000523441 TRAV10A0A0B4J240 114 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 IGHV4-28A0A0C4DH34 117 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 FOXI3A8MTJ6 420 aaPredicted RBP8.47□□□□□ -1.05
SDCBP-211ENST00000523441 GNB3P16520 340 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 ARFRP1Q13795 201 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 RAB11BQ15907 218 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 UBE2DNLQ8IWF7 75 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 FAM89BQ8N5H3 189 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 POM121L12Q8N7R1 296 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 RNF2Q99496 336 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 SCRT1Q9BWW7 348 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 ZNF436Q9C0F3 470 aaPredicted RBP8.47□□□□□ -1.05
SDCBP-211ENST00000523441 HRASLSQ9HDD0 168 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 TAS2R8Q9NYW2 309 aa8.47□□□□□ -1.05
SDCBP-211ENST00000523441 IGKV1D-8A0A087WSZ0 117 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 EFCAB10A6NFE3 127 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 DENRO43583 198 aaKnown RBP8.46□□□□□ -1.06
SDCBP-211ENST00000523441 CRYGCP07315 174 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 RBMY1A1P0DJD3 496 aaKnown RBP8.46□□□□□ -1.06
SDCBP-211ENST00000523441 RBMY1CP0DJD4 496 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 NFYAP23511 347 aaPredicted RBP8.46□□□□□ -1.06
SDCBP-211ENST00000523441 TALDO1P37837 337 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 WNT4P56705 351 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 RPL8P62917 257 aaKnown RBP8.46□□□□□ -1.06
SDCBP-211ENST00000523441 RBMY1FQ15415 496 aaKnown RBP8.46□□□□□ -1.06
SDCBP-211ENST00000523441 PVRIGQ6DKI7 326 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 SLC25A24Q6NUK1 477 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 AHSA2Q719I0 299 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 H1FOOQ8IZA3 346 aaPredicted RBP8.46□□□□□ -1.06
SDCBP-211ENST00000523441 OR56B1Q8NGI3 324 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 VSTM2AQ8TAG5 236 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 TMEM167AQ8TBQ9 72 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 TMEM203Q969S6 136 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 RAB3CQ96E17 227 aa8.46□□□□□ -1.06
SDCBP-211ENST00000523441 CGB1A6NKQ9 187 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 TNFSF12O43508 249 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 YIF1AO95070 293 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 IFNA10P01566 189 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 HLA-GP17693 338 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 RASSF2P50749 326 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 Q56UQ5 140 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 HES5Q5TA89 166 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 PUSL1Q8N0Z8 303 aaKnown RBP8.45□□□□□ -1.06
SDCBP-211ENST00000523441 OR10W1Q8NGF6 305 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 OR4S2Q8NH73 311 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 PHYHIPQ92561 330 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 GFI1Q99684 422 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 KCNK7Q9Y2U2 307 aa8.45□□□□□ -1.06
SDCBP-211ENST00000523441 RBMX2Q9Y388 322 aaKnown RBP8.45□□□□□ -1.06
SDCBP-211ENST00000523441 AGRNO00468 2067 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 DEFB131BA0A096LNP1 70 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 TRAV3A0A0B4J244 114 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 IGHV3-66A0A0C4DH42 116 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 SLC17A2O00624 439 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 MRPS14O60783 128 aaKnown RBP8.44□□□□□ -1.06
SDCBP-211ENST00000523441 P0DMU3 169 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 FAM231AP0DMU4 169 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 FAM231CP0DMU5 169 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 CD36P16671 472 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 ADMP35318 185 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 MAS1LP35410 378 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 DEFB131AP59861 70 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 RPL11P62913 178 aaKnown RBP8.44□□□□□ -1.06
SDCBP-211ENST00000523441 C2orf76Q3KRA6 126 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 Q8NAQ8 132 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 FAM3DQ96BQ1 224 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 RHPN1-AS1Q9BWJ2 59 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 HINT2Q9BX68 163 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 CLEC5AQ9NY25 188 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 SMPD3Q9NY59 655 aaPredicted RBP8.44□□□□□ -1.06
SDCBP-211ENST00000523441 THYN1Q9P016 225 aa8.44□□□□□ -1.06
SDCBP-211ENST00000523441 ELF5Q9UKW6 265 aaPredicted RBP8.44□□□□□ -1.06
SDCBP-211ENST00000523441 ELOA3CA0A087WX78 387 aaPredicted RBP8.43□□□□□ -1.06
SDCBP-211ENST00000523441 IGKV1D-13A0A0B4J2D9 117 aa8.43□□□□□ -1.06
SDCBP-211ENST00000523441 TMEM272A0A1B0GTI8 110 aa8.43□□□□□ -1.06
SDCBP-211ENST00000523441 C16orf90A8MZG2 172 aa8.43□□□□□ -1.06
SDCBP-211ENST00000523441 NDUFA4O00483 81 aa8.43□□□□□ -1.06
SDCBP-211ENST00000523441 IGKV1-13P0DP09 117 aa8.43□□□□□ -1.06
SDCBP-211ENST00000523441 PTBP1P26599 531 aaKnown RBP eCLIP8.43□□□□□ -1.06
SDCBP-211ENST00000523441 NANOGP1Q8N7R0 232 aa8.43□□□□□ -1.06
SDCBP-211ENST00000523441 TMEM116Q8NCL8 245 aa8.43□□□□□ -1.06
SDCBP-211ENST00000523441 BPIFB6Q8NFQ5 453 aa8.43□□□□□ -1.06
SDCBP-211ENST00000523441 CMTM3Q96MX0 182 aa8.43□□□□□ -1.06
SDCBP-211ENST00000523441 SMPXQ9UHP9 88 aa8.43□□□□□ -1.06
SDCBP-211ENST00000523441 CELA1Q9UNI1 258 aa8.43□□□□□ -1.06
SDCBP-211ENST00000523441 IGHV7-4-1A0A0J9YVY3 117 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 IGLC7A0M8Q6 106 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 DNASE2O00115 360 aaPredicted RBP8.42□□□□□ -1.06
SDCBP-211ENST00000523441 CHEK1O14757 476 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 HRASP01112 189 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 CD1AP06126 327 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 CDK1P06493 297 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 OR13C7P0DN81 318 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 OR2B8PP59922 312 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 TCF24Q7RTU0 167 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 STHQ8IWL8 128 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 MFSD4AQ8N468 514 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 MS4A15Q8N5U1 240 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms