RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 SMIM4Q8WVI0 70 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 RTN4IP1Q8WWV3 396 aaPredicted RBP2.82□□□□□ -1.96
NPM1-210ENST00000523339 ACOT12Q8WYK0 555 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 CORO2AQ92828 525 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 DIRAS2Q96HU8 199 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 CLUHP3Q96NS8 147 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 CLCC1Q96S66 551 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 TSC22D3Q99576 134 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 THAP7Q9BT49 309 aaPredicted RBP2.82□□□□□ -1.96
NPM1-210ENST00000523339 FAM103A1Q9BTL3 118 aaKnown RBP2.82□□□□□ -1.96
NPM1-210ENST00000523339 NDUFAF3Q9BU61 184 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 FXYD6Q9H0Q3 95 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 METTL9Q9H1A3 318 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 CKLFQ9UBR5 152 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 MTFP1Q9UDX5 166 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 ZNF580Q9UK33 172 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 RAB22AQ9UL26 194 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 APLNQ9ULZ1 77 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 ST3GAL6Q9Y274 331 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 PEX16Q9Y5Y5 336 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 SELENOKQ9Y6D0 94 aa2.82□□□□□ -1.96
NPM1-210ENST00000523339 TRBV6-6A0A0A6YYG2 114 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 IGHV7-81A0A0B4J1V7 117 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 TRAV10A0A0B4J240 114 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 ANKRD20A5PA0PJZ0 165 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 ZNF320A2RRD8 509 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 MSGN1A6NI15 193 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 FAM25AB3EWG3 89 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 FAM25CB3EWG5 89 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 FAM25GB3EWG6 89 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 M0QYG6 137 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 DEFB4AO15263 64 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 RGS5O15539 181 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 NOL3O60936 208 aaKnown RBP2.81□□□□□ -1.96
NPM1-210ENST00000523339 TUSC2O75896 110 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 OR7C1O76099 320 aaPredicted RBP2.81□□□□□ -1.96
NPM1-210ENST00000523339 HLA-DRB1P01911 266 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 MT-ND4P03905 459 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 CD74P04233 296 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 SCTP09683 121 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 GSTT2P0CG29 244 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 GSTT2BP0CG30 244 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 UBBP0CG47 229 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 GTF2F2P13984 249 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 AADACP22760 399 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 LINC00205P59089 165 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 PAX5Q02548 391 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 EIF4EBP1Q13541 118 aaPredicted RBP2.81□□□□□ -1.96
NPM1-210ENST00000523339 RSU1Q15404 277 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 HMGN3Q15651 99 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 LGALS9BQ3B8N2 356 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 PAN3Q58A45 887 aaKnown RBP2.81□□□□□ -1.96
NPM1-210ENST00000523339 IGSF11Q5DX21 431 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 TMEM69Q5SWH9 247 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 AADACL3Q5VUY0 350 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 ZNF57Q68EA5 555 aaPredicted RBP2.81□□□□□ -1.96
NPM1-210ENST00000523339 RAB12Q6IQ22 244 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 FAM131AQ6UXB0 335 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 LINC00299Q6ZSB3 139 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 LHFPL1Q86WI0 220 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 HOGA1Q86XE5 327 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 PRR18Q8N4B5 295 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 Q8N6K4 173 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 CHST4Q8NCG5 386 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 LFNGQ8NES3 379 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 OR4C16Q8NGL9 310 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 OR1L6Q8NGR2 347 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 OR11H2Q8NH07 326 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 OR4K15Q8NH41 348 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 OR1L1Q8NH94 360 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 GRPEL2Q8TAA5 225 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 KCNG3Q8TAE7 436 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 TMEM230Q96A57 120 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 RAB3CQ96E17 227 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 CMTM3Q96MX0 182 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 MYCBPQ99417 103 aaPredicted RBP2.81□□□□□ -1.96
NPM1-210ENST00000523339 GPER1Q99527 375 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 PHB2Q99623 299 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 DPCDQ9BVM2 203 aaPredicted RBP2.81□□□□□ -1.96
NPM1-210ENST00000523339 SEBOXQ9HB31 216 aaPredicted RBP2.81□□□□□ -1.96
NPM1-210ENST00000523339 HRASLSQ9HDD0 168 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 Q9N2K0 584 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 PLSCR3Q9NRY6 295 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 COA4Q9NYJ1 87 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 TECRQ9NZ01 308 aaKnown RBP2.81□□□□□ -1.96
NPM1-210ENST00000523339 OR1A1Q9P1Q5 309 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 GNG12Q9UBI6 72 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 GHRLQ9UBU3 117 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 KIF25Q9UIL4 384 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 HSF4Q9ULV5 492 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 FLVCR2Q9UPI3 526 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 VPS13DQ5THJ4 4388 aa2.81□□□□□ -1.96
NPM1-210ENST00000523339 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
NPM1-210ENST00000523339 IGHV3-43A0A0B4J1X8 118 aa2.8□□□□□ -1.96
NPM1-210ENST00000523339 LINC00854A0A1B0GVQ3 168 aa2.8□□□□□ -1.96
NPM1-210ENST00000523339 FABP12A6NFH5 140 aa2.8□□□□□ -1.96
NPM1-210ENST00000523339 OR5H14A6NHG9 310 aa2.8□□□□□ -1.96
NPM1-210ENST00000523339 FAM90A7PA6NKC0 464 aa2.8□□□□□ -1.96
NPM1-210ENST00000523339 ZNF785A8K8V0 405 aa2.8□□□□□ -1.96
NPM1-210ENST00000523339 MPTX1A8MV57 137 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms