RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-216	ENST00000521918	STARD9	Q9P2P6	4700 aa		4.56	□□□□□ -1.68
SPIDR-216	ENST00000521918	LYST	Q99698	3801 aa		4.56	□□□□□ -1.68
SPIDR-216	ENST00000521918	RYR3	Q15413	4870 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918		A0A1B0GW64	132 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	MEIS3P1	A6NDR6	274 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918		H3BUA1	57 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	RBMXL2	O75526	392 aa	Known RBP	4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	CRYZL1	O95825	349 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	PPY	P01298	95 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	LGALS1	P09382	135 aa	Known RBP	4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	AADAC	P22760	399 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	HOXD3	P31249	432 aa	Predicted RBP	4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	CBX5	P45973	191 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	ALDH3B2	P48448	385 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	ARPC4	P59998	168 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	ZNF616	Q08AN1	781 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	FXYD3	Q14802	87 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	PRSS8	Q16651	343 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	ACTBL2	Q562R1	376 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	SUMO4	Q6EEV6	95 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	DGAT2L7P	Q6IED9	249 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	PYHIN1	Q6K0P9	492 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	TMEM65	Q6PI78	240 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	UNQ5815/PRO19632	Q6UWF5	114 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	IDO2	Q6ZQW0	420 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	KCTD9	Q7L273	389 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	PUSL1	Q8N0Z8	303 aa	Known RBP	4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	TEX45	Q8NA69	505 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	POC5	Q8NA72	575 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	LFNG	Q8NES3	379 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	OR11H1	Q8NG94	326 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	OR5AP2	Q8NGF4	316 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	OR5M8	Q8NGP6	311 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	GRPEL2	Q8TAA5	225 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	OSR1	Q8TAX0	266 aa	Predicted RBP	4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	CASTOR1	Q8WTX7	329 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	DPF1	Q92782	380 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	MCRIP2	Q9BUT9	160 aa	Known RBP	4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	GPR61	Q9BZJ8	451 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	FXYD6	Q9H0Q3	95 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	DIABLO	Q9NR28	239 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	A3GALT2	U3KPV4	340 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	CSMD3	Q7Z407	3707 aa		4.55	□□□□□ -1.68
SPIDR-216	ENST00000521918	SORL1	Q92673	2214 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	IGHV4OR15-8	A0A075B7B6	117 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918		A0A087WW49	117 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	TEX22	C9J3V5	150 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918		J3QRK9	145 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	FCGR3B	O75015	233 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	APOA1	P02647	267 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	OR8U8	P0C7N1	319 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	ELK1	P19419	428 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	FCGR2C	P31995	323 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	DEFA5	Q01523	94 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	CBX3	Q13185	183 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	DCTN2	Q13561	401 aa	Known RBP	4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	CDK10	Q15131	360 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	VMA21	Q3ZAQ7	101 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	TMEM69	Q5SWH9	247 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	C10orf55	Q5SWW7	151 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	ZNF66	Q6ZN08	573 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	ZNF818P	Q6ZRF7	136 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	VKORC1L1	Q8N0U8	176 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	ADAD2	Q8NCV1	583 aa	Known RBP	4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	OR1N2	Q8NGR9	330 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	MRAP	Q8TCY5	172 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	GPX8	Q8TED1	209 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	SECTM1	Q8WVN6	248 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	TCTEX1D2	Q8WW35	142 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	GIMAP1	Q8WWP7	306 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	SRSF12	Q8WXF0	261 aa	Known RBP	4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	S100A16	Q96FQ6	103 aa	Known RBP	4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	TMEM68	Q96MH6	324 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	CMTM3	Q96MX0	182 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	OR5B12	Q96R08	314 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	HSD17B10	Q99714	261 aa	Known RBP	4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	MRPS26	Q9BYN8	205 aa	Known RBP	4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	SLA2	Q9H6Q3	261 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	PLEKHA2	Q9HB19	425 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	CCL28	Q9NRJ3	127 aa		4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	RBM7	Q9Y580	266 aa	Known RBP	4.54	□□□□□ -1.68
SPIDR-216	ENST00000521918	SACS	Q9NZJ4	4579 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	TRBV9	A0A0B4J1U6	114 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	CGB1	A6NKQ9	187 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918		E7EUB6	86 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	LINC01619	G3V211	115 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	TNFSF12	O43508	249 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	HPGDS	O60760	199 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	RAMP3	O60896	148 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	KBTBD11	O94819	623 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	IGHV3-11	P01762	117 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	FCER2	P06734	321 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	GNRHR	P30968	328 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	HRH1	P35367	487 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	KIR2DS2	P43631	304 aa		4.53	□□□□□ -1.68
SPIDR-216	ENST00000521918	RFX2	P48378	723 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms