RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 TRBV6-6A0A0A6YYG2 114 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 A0A1B0GU03 582 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 TRIM64CA6NLI5 447 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 FOXI3A8MTJ6 420 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-208ENST00000520228 K7EQD1 137 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 AIREO43918 545 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 GAPDHP04406 335 aaKnown RBP5.35□□□□□ -1.55
SDCBP-208ENST00000520228 IL3RAP26951 378 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 KIR2DS4P43632 304 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 RAB7AP51149 207 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 MRPS15P82914 257 aaKnown RBP5.35□□□□□ -1.55
SDCBP-208ENST00000520228 HTD2P86397 168 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 MXD1Q05195 221 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 DIAPH2-AS1Q14236 149 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 HMGN3Q15651 99 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 MORN2Q502X0 79 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 CT45A1Q5HYN5 189 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 SFXN4Q6P4A7 337 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 MOB1BQ7L9L4 216 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 LINC00311Q8N616 119 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 OR10R2Q8NGX6 335 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 CT45A3Q8NHU0 189 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 CAPSLQ8WWF8 208 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 IL1F10Q8WWZ1 152 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 YIPF6Q96EC8 236 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 AKR1E2Q96JD6 320 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 CMSS1Q9BQ75 279 aaKnown RBP5.35□□□□□ -1.55
SDCBP-208ENST00000520228 HDHD3Q9BSH5 251 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-208ENST00000520228 PECRQ9BY49 303 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 ATG5Q9H1Y0 275 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 SRD5A3Q9H8P0 318 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 MGAT4AQ9UM21 535 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 NBEAL1Q6ZS30 2694 aa5.35□□□□□ -1.55
SDCBP-208ENST00000520228 A0A075B6Q4 140 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 A0A0J9YWU9 116 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 SERPINE3A8MV23 424 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 TRDCB7Z8K6 153 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 HSD17B6O14756 317 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 SLC31A2O15432 143 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 YPEL1O60688 119 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 CD3GP09693 182 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 HIST1H1DP16402 221 aaKnown RBP5.34□□□□□ -1.55
SDCBP-208ENST00000520228 PPP1CCP36873 323 aaKnown RBP5.34□□□□□ -1.55
SDCBP-208ENST00000520228 TALDO1P37837 337 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 REG1BP48304 166 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 LSM3P62310 102 aaKnown RBP5.34□□□□□ -1.55
SDCBP-208ENST00000520228 GNMTQ14749 295 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 CDNFQ49AH0 187 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 IDNKQ5T6J7 187 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 ZNF880Q6PDB4 577 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 SLC25A48Q6ZT89 311 aaKnown RBP5.34□□□□□ -1.55
SDCBP-208ENST00000520228 MOB3BQ86TA1 216 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 LYG1Q8N1E2 194 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 DRAM1Q8N682 238 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 ZNF439Q8NDP4 499 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 OR56B4Q8NH76 319 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 YPEL2Q96QA6 119 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 CABLES2Q9BTV7 478 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 FNDC4Q9H6D8 234 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-208ENST00000520228 RANBP3Q9H6Z4 567 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-208ENST00000520228 JPT1Q9UK76 154 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 SIGLEC9Q9Y336 463 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 DOCK11Q5JSL3 2073 aa5.34□□□□□ -1.55
SDCBP-208ENST00000520228 IGHV1-3A0A0C4DH29 117 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 MFNGO00587 321 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 TXNL1O43396 289 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 SCGNO76038 276 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 OR2F2O95006 317 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 NXPH4O95158 308 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 SCTP09683 121 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 C4BPBP20851 252 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 ZBTB25P24278 435 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 CEACAM6P40199 344 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 ZNF137PP52743 207 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 BLCAPP62952 87 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 HLA-DRB3P79483 266 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 ZNF816Q0VGE8 651 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-208ENST00000520228 ARFRP1Q13795 201 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 HES1Q14469 280 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 ARL6IP1Q15041 203 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 LY6G6FQ5SQ64 297 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 TGIF2LXQ8IUE1 241 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 Q8N2B8 174 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 OR13F1Q8NGS4 319 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 SGMS2Q8NHU3 365 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 LGALS14Q8TCE9 139 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 RTN4IP1Q8WWV3 396 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-208ENST00000520228 RBM14Q96PK6 669 aaKnown RBP5.33□□□□□ -1.56
SDCBP-208ENST00000520228 VGLL1Q99990 258 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 FUNDC2Q9BWH2 189 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 ZNF702PQ9H963 129 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 ETV7Q9Y603 341 aa5.33□□□□□ -1.56
SDCBP-208ENST00000520228 MGAM2Q2M2H8 2515 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 IGHV3-72A0A0B4J1Y9 119 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 M0QZK8 103 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 FABP7O15540 132 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 LANCL1O43813 399 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 IGKV1D-33P01593 117 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 IGKV1-33P01594 117 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 FCGR3AP08637 254 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms