RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 LFNGQ8NES3 379 aa7.25□□□□□ -1.25
HDAC3-215ENST00000519474 BPIFCQ8NFQ6 507 aa7.25□□□□□ -1.25
HDAC3-215ENST00000519474 OR1N2Q8NGR9 330 aa7.25□□□□□ -1.25
HDAC3-215ENST00000519474 LGALS14Q8TCE9 139 aa7.25□□□□□ -1.25
HDAC3-215ENST00000519474 CASTOR1Q8WTX7 329 aa7.25□□□□□ -1.25
HDAC3-215ENST00000519474 DDB2Q92466 427 aa7.25□□□□□ -1.25
HDAC3-215ENST00000519474 YIPF6Q96EC8 236 aa7.25□□□□□ -1.25
HDAC3-215ENST00000519474 RRNAD1Q96FB5 475 aaKnown RBP7.25□□□□□ -1.25
HDAC3-215ENST00000519474 OR5B12Q96R08 314 aa7.25□□□□□ -1.25
HDAC3-215ENST00000519474 TSNAXQ99598 290 aaKnown RBP7.25□□□□□ -1.25
HDAC3-215ENST00000519474 FAM103A1Q9BTL3 118 aaKnown RBP7.25□□□□□ -1.25
HDAC3-215ENST00000519474 OR2D2Q9H210 308 aa7.25□□□□□ -1.25
HDAC3-215ENST00000519474 VSIG4Q9Y279 399 aa7.25□□□□□ -1.25
HDAC3-215ENST00000519474 ALG5Q9Y673 324 aa7.25□□□□□ -1.25
HDAC3-215ENST00000519474 TRAV18A0A075B6X5 111 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 LINC00473A8K010 186 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 SLC22A5O76082 557 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 CA2P00918 260 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 IGLV2-14P01704 120 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 APOA2P02652 100 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 NFYAP23511 347 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-215ENST00000519474 RPS19P39019 145 aaKnown RBP7.24□□□□□ -1.25
HDAC3-215ENST00000519474 SCAND1P57086 179 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 NUTF2P61970 127 aaKnown RBP7.24□□□□□ -1.25
HDAC3-215ENST00000519474 GNB1P62873 340 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 PITPNAQ00169 270 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 CD300CQ08708 224 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 FHL3Q13643 280 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 CNIH2Q6PI25 160 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 UNQ5815/PRO19632Q6UWF5 114 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 NUDCD2Q8WVJ2 157 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 GLMPQ8WWB7 406 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 SLC25A38Q96DW6 304 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 FAM210BQ96KR6 192 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 RHOVQ96L33 236 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 MS4A10Q96PG2 267 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 GINS4Q9BRT9 223 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 FOXA2Q9Y261 457 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-215ENST00000519474 OR2W1Q9Y3N9 320 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 RBM7Q9Y580 266 aaKnown RBP7.24□□□□□ -1.25
HDAC3-215ENST00000519474 A3GALT2U3KPV4 340 aa7.24□□□□□ -1.25
HDAC3-215ENST00000519474 A0A087WXM4 84 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 IGKV1D-13A0A0B4J2D9 117 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 SCGNO76038 276 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 IGKV1-13P0DP09 117 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 RRASP10301 218 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 PTHLHP12272 177 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 RAB25P57735 213 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 BRWD1-AS2P59051 145 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 RPL30P62888 115 aaKnown RBP7.23□□□□□ -1.25
HDAC3-215ENST00000519474 ECSCRQ19T08 205 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 EIF4E3Q8N5X7 224 aaKnown RBP7.23□□□□□ -1.25
HDAC3-215ENST00000519474 GVQW1Q8N7I0 195 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 TCTEX1D1Q8N7M0 179 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 TSPAN14Q8NG11 270 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 OR5M8Q8NGP6 311 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 STOML3Q8TAV4 291 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 DCUN1D4Q92564 292 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 MRGPRFQ96AM1 343 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 PFDN5Q99471 154 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 TPPP3Q9BW30 176 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 ANXA10Q9UJ72 324 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 KCNIP3Q9Y2W7 256 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 GOLT1BQ9Y3E0 138 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 ETV7Q9Y603 341 aa7.23□□□□□ -1.25
HDAC3-215ENST00000519474 MSGN1A6NI15 193 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 MPTX1A8MV57 137 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 KRBOX1C9JBD0 128 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 TUSC2O75896 110 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 PPBPP02775 128 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 ZP3P21754 424 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 LSM3P62310 102 aaKnown RBP7.22□□□□□ -1.25
HDAC3-215ENST00000519474 RBX1P62877 108 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 NHLH2Q02577 135 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 ZNF616Q08AN1 781 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 EIF4EBP1Q13541 118 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-215ENST00000519474 ZFP69Q49AA0 526 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 C9orf66Q5T8R8 295 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 HOGA1Q86XE5 327 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 ZNF645Q8N7E2 425 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 TEX45Q8NA69 505 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 ABHD5Q8WTS1 349 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 DLX4Q92988 240 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-215ENST00000519474 RAB24Q969Q5 203 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 BSCL2Q96G97 398 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-215ENST00000519474 ADTRPQ96IZ2 230 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 AUNIPQ9H7T9 357 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 CLEC5AQ9NY25 188 aa7.22□□□□□ -1.25
HDAC3-215ENST00000519474 SEC14L6B5MCN3 397 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 AIREO43918 545 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 RAMP3O60896 148 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 CNIH1O95406 144 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 IGHV3-11P01762 117 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 HSPB1P04792 205 aaKnown RBP7.21□□□□□ -1.26
HDAC3-215ENST00000519474 UBE2KP61086 200 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 DGCR2P98153 550 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 GAMTQ14353 236 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 RTL8BQ17RB0 113 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 OR2B11Q5JQS5 317 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 MFSD4AQ8N468 514 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms