RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 C1orf122Q6ZSJ8 110 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 LINC01356Q8N9X3 169 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 OR2G3Q8NGZ4 309 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 LYPD6BQ8NI32 183 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 OSR1Q8TAX0 266 aaPredicted RBP11.69□□□□□ -0.54
CLN8-204ENST00000519254 GNPNAT1Q96EK6 184 aaPredicted RBP11.69□□□□□ -0.54
CLN8-204ENST00000519254 LINC00052Q96N35 136 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 TBX15Q96SF7 602 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 HRH4Q9H3N8 390 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 HIF1ANQ9NWT6 349 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 NUP50Q9UKX7 468 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 TCF19Q9Y242 345 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 C15orf62A8K5M9 175 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 H7C2Y5 167 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 UPK2O00526 184 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 IFNA5P01569 189 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 HOXB4P17483 251 aaPredicted RBP11.69□□□□□ -0.54
CLN8-204ENST00000519254 RAB5CP51148 216 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 HLA-DRB5Q30154 266 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 TGIF2LXQ8IUE1 241 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 LILRB2Q8N423 598 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 LHX4Q969G2 390 aa11.69□□□□□ -0.54
CLN8-204ENST00000519254 PDZD2O15018 2839 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 CSMD1Q96PZ7 3565 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 NUDT19A8MXV4 375 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 SMAD7O15105 426 aaKnown RBP11.68□□□□□ -0.54
CLN8-204ENST00000519254 SHOXO15266 292 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 LY86O95711 162 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 MYOD1P15172 320 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 IL3RAP26951 378 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 RPS16P62249 146 aaKnown RBP11.68□□□□□ -0.54
CLN8-204ENST00000519254 LRRC75BQ2VPJ9 315 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 TMEM249Q2WGJ8 235 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 HCP5Q6MZN7 132 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 IL34Q6ZMJ4 242 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 THNSL2Q86YJ6 484 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 PUSL1Q8N0Z8 303 aaKnown RBP11.68□□□□□ -0.54
CLN8-204ENST00000519254 BEND2Q8NDZ0 799 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 PARD6GQ9BYG4 376 aaPredicted RBP11.68□□□□□ -0.54
CLN8-204ENST00000519254 BET1LQ9NYM9 111 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 WNK2Q9Y3S1 2297 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 CR1P17927 2039 aa11.68□□□□□ -0.54
CLN8-204ENST00000519254 PRRC2AP48634 2157 aaKnown RBP11.68□□□□□ -0.54
CLN8-204ENST00000519254 TRAV20A0A0B4J274 112 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 RNASEK-C17orf49H0YIS7 233 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 BUB1B-PAK6H3BSN5 160 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 TRIM77I1YAP6 450 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 TGFAP01135 160 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 SAA1P0DJI8 122 aaPredicted RBP11.67□□□□□ -0.54
CLN8-204ENST00000519254 IGHV4-31P0DP07 118 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 ZP3P21754 424 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 CAMLGP49069 296 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 HSPE1P61604 102 aaKnown RBP11.67□□□□□ -0.54
CLN8-204ENST00000519254 PAX8Q06710 450 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 PJVKQ0ZLH3 352 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 PDPNQ86YL7 162 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 CIARTQ8N365 385 aaPredicted RBP11.67□□□□□ -0.54
CLN8-204ENST00000519254 OR4P4Q8NGL7 312 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 FLYWCH2Q96CP2 140 aaKnown RBP11.67□□□□□ -0.54
CLN8-204ENST00000519254 C1orf159Q96HA4 380 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 HARBI1Q96MB7 349 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 AIFM2Q9BRQ8 373 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 HEYLQ9NQ87 328 aaPredicted RBP11.67□□□□□ -0.54
CLN8-204ENST00000519254 PRNDQ9UKY0 176 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 WASHC3Q9Y3C0 194 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 UMAD1C9J7I0 102 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 KRBOX1C9JBD0 128 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 PRH1P02810 166 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 F2RL1P55085 397 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 SRSF3P84103 164 aaKnown RBP11.67□□□□□ -0.54
CLN8-204ENST00000519254 ATP6V1FQ16864 119 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 UQCC3Q6UW78 93 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 BPIFCQ8NFQ6 507 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 OR11H6Q8NGC7 330 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 OR10P1Q8NGE3 313 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 OR4C13Q8NGP0 309 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 SCGB1C1Q8TD33 95 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 RSG1Q9BU20 258 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 C7orf69Q9H7B7 122 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 UNKLQ9H9P5 680 aaKnown RBP11.67□□□□□ -0.54
CLN8-204ENST00000519254 OR51B2Q9Y5P1 312 aa11.67□□□□□ -0.54
CLN8-204ENST00000519254 PLXNB1O43157 2135 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 ITPR2Q14571 2701 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 IGHV3OR16-10A0A075B7F0 116 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 KBTBD11O94819 623 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 IGLV2-23P01705 113 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 OR8U8P0C7N1 319 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 TUSC1Q2TAM9 212 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 SLC25A24Q6NUK1 477 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 TMEM170AQ8WVE7 144 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 PINX1Q96BK5 328 aaKnown RBP11.66□□□□□ -0.54
CLN8-204ENST00000519254 CLCC1Q96S66 551 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 WDR61Q9GZS3 305 aaKnown RBP11.66□□□□□ -0.54
CLN8-204ENST00000519254 HIPK2Q9H2X6 1198 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 ZNF257Q9Y2Q1 563 aa11.66□□□□□ -0.54
CLN8-204ENST00000519254 AMMECR1Q9Y4X0 333 aaPredicted RBP11.66□□□□□ -0.54
CLN8-204ENST00000519254 MAP1AP78559 2803 aaPredicted RBP11.65□□□□□ -0.54
CLN8-204ENST00000519254 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
CLN8-204ENST00000519254 LY6LH3BQJ8 138 aa11.65□□□□□ -0.54
CLN8-204ENST00000519254 RRHO14718 337 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms