RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 LPCAT3Q6P1A2 487 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 CMTM1Q8IZ96 169 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 OR51H1Q8NH63 302 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 OR52I2Q8NH67 350 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 FYTTD1Q96QD9 318 aaKnown RBP8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 CCDC59Q9P031 241 aaKnown RBP8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 KLK11Q9UBX7 282 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 IGLV11-55A0A075B6I3 123 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 TRAV3A0A0B4J244 114 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 MARCH11A6NNE9 402 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 BMPR1BO00238 502 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 PRH1P02810 166 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 RLN1P04808 185 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 AREGP15514 252 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 ECI1P42126 302 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 MECP2P51608 486 aaKnown RBP8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 RND3P61587 244 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 MRPS10P82664 201 aaKnown RBP8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 SSBP1Q04837 148 aaKnown RBP8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 THOC7Q6I9Y2 204 aaKnown RBP8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 SSX9Q7RTT3 188 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 ARRDC1Q8N5I2 433 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 FCAMRQ8WWV6 532 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 PRR25Q96S07 402 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 TMEM140Q9NV12 185 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 EXTL2Q9UBQ6 330 aa8.65□□□□□ -1.02
IGHV3-25-201ENST00000518224 FAM25AB3EWG3 89 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 FAM25CB3EWG5 89 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 FAM25GB3EWG6 89 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 GABARAPH6UMI1 98 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 CTDSP2O14595 271 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 CTDSPLO15194 276 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 MPPED1O15442 326 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 SAP30O75446 220 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 MYOD1P15172 320 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 HIST1H1BP16401 226 aaKnown RBP8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 DEFA5Q01523 94 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 ATP5G2Q06055 141 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 EXOSC2Q13868 293 aaKnown RBP8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 C15orf32Q32M92 178 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 CLVS1Q8IUQ0 354 aaPredicted RBP8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 LAX1Q8IWV1 398 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 SLC38A6Q8IZM9 456 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 TMEM229BQ8NBD8 167 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 OR9G4Q8NGQ1 327 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 OR6Q1Q8NGQ2 317 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 ZNF486Q96H40 463 aaPredicted RBP8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 SOSTQ9BQB4 213 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 ELOVL1Q9BW60 279 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 SLIRPQ9GZT3 109 aaKnown RBP8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 NXF2Q9GZY0 626 aaKnown RBP8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 NDUFA4L2Q9NRX3 87 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 RABL2AQ9UBK7 228 aaPredicted RBP8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 RABL2BQ9UNT1 228 aa8.64□□□□□ -1.03
IGHV3-25-201ENST00000518224 ANKRD34BA5PLL1 514 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 H3BMQ9 156 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 IGKV1-39P01597 117 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 CD3DP04234 171 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 IGKV1D-39P04432 117 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 CSN3P07498 182 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 SPNP16150 400 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 LPAR6P43657 344 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 SYNJ2BPP57105 145 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 TSPAN5P62079 268 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 DEFB121Q5J5C9 76 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 C19orf35Q6ZS72 473 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 HSD17B13Q7Z5P4 300 aaPredicted RBP8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 DMBX1Q8NFW5 382 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 SMIM4Q8WVI0 70 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 SEC22AQ96IW7 307 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 CCDC140Q96MF4 163 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 OR4C12Q96R67 309 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 THAP7Q9BT49 309 aaPredicted RBP8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 QTRT1Q9BXR0 403 aaKnown RBP8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 HRASLSQ9HDD0 168 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 TMEM14BQ9NUH8 114 aa8.63□□□□□ -1.03
IGHV3-25-201ENST00000518224 TEX50A0A1B0GTY4 177 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 A8MZ25 164 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 M0QYG6 137 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 LGALS9O00182 355 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 OR2J3O76001 311 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 NDUFB8O95169 186 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 DHFRP00374 187 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 P0C879 139 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 NHLRC4P0CG21 123 aaPredicted RBP8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 GP9P14770 177 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 ERVK-16P61578 105 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 WT1-ASQ06250 92 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 RNASE10Q5GAN6 216 aaKnown RBP8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 ADAMTSL5Q6ZMM2 481 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 TBC1D26Q86UD7 250 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 GPHB5Q86YW7 130 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 OR4D10Q8NGI6 311 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 OR1L8Q8NGR8 309 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 OR5B3Q8NH48 314 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 TERB2Q8NHR7 220 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 MRGPRFQ96AM1 343 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 ISOC1Q96CN7 298 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 ATP6V0BQ99437 205 aa8.62□□□□□ -1.03
IGHV3-25-201ENST00000518224 COMMD5Q9GZQ3 224 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms