RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 OR1S2Q8NGQ3 325 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 RFESDQ8TAC1 157 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 ZNF418Q8TF45 676 aaPredicted RBP2.21□□□□□ -2.06
SKP1-204ENST00000517691 FAM3DQ96BQ1 224 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 YIPF6Q96EC8 236 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 MRPS24Q96EL2 167 aaKnown RBP2.21□□□□□ -2.06
SKP1-204ENST00000517691 CLCC1Q96S66 551 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 TBX15Q96SF7 602 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 FAAP24Q9BTP7 215 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 TMEM59Q9BXS4 323 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 MRPS26Q9BYN8 205 aaKnown RBP2.21□□□□□ -2.06
SKP1-204ENST00000517691 HEXA-AS1Q9H8Q6 139 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 MAP6D1Q9H9H5 199 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 HRASLSQ9HDD0 168 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 IFT46Q9NQC8 304 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 TNFRSF19Q9NS68 423 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 TRAPPC2LQ9UL33 140 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 RCL1Q9Y2P8 373 aaKnown RBP2.21□□□□□ -2.06
SKP1-204ENST00000517691 SOX21Q9Y651 276 aaPredicted RBP2.21□□□□□ -2.06
SKP1-204ENST00000517691 DYSFO75923 2080 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 TLN2Q9Y4G6 2542 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 IGHV1-69DA0A0B4J2H0 117 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 CENPVL3A0A0U1RRI6 287 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 TMEM30CPA0ZSE6 113 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 MEIOCA2RUB1 952 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 FAM172BPA6NC97 362 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 H0Y980 276 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 AIPO00170 330 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 FCN1O00602 326 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 SOCS1O15524 211 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 TCF21O43680 179 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 PDCD6O75340 191 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 IGHV1-69P01742 117 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 IGHV3-7P01780 117 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 ARG1P05089 322 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 IGHV1-8P0DP01 117 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 RAB4AP20338 218 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 GZMHP20718 246 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 OMGP23515 440 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 DTYMKP23919 212 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 PRTN3P24158 256 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 CDK2P24941 298 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 NFYBP25208 207 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 ERP29P30040 261 aaKnown RBP2.2□□□□□ -2.06
SKP1-204ENST00000517691 HOXD3P31249 432 aaPredicted RBP2.2□□□□□ -2.06
SKP1-204ENST00000517691 FGF9P31371 208 aaPredicted RBP2.2□□□□□ -2.06
SKP1-204ENST00000517691 TGFBR1P36897 503 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 VEGFCP49767 419 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 RIPPLY3P57055 190 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 RPS27AP62979 156 aaKnown RBP2.2□□□□□ -2.06
SKP1-204ENST00000517691 BAMBIQ13145 260 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 UNC119Q13432 240 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 SLC9A3R2Q15599 337 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 MPV17LQ2QL34 196 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 NHLRC3Q5JS37 347 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 KLF17Q5JT82 389 aaPredicted RBP2.2□□□□□ -2.06
SKP1-204ENST00000517691 PIK3CD-AS1Q5SR53 167 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 SLC35E4Q6ICL7 350 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 GDPGP1Q6ZNW5 385 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 Q6ZTK2 550 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 C6orf201Q7Z4U5 140 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 LYPD6Q86Y78 171 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 Q8N402 240 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 Q8N7P7 452 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 SIGLECL1Q8N7X8 197 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 OR13D1Q8NGV5 346 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 OR4K15Q8NH41 348 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 C8orf46Q8TAG6 207 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 UBALD1Q8TB05 177 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 MRGPRDQ8TDS7 321 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 PHLDA1Q8WV24 401 aaPredicted RBP2.2□□□□□ -2.06
SKP1-204ENST00000517691 DYRK2Q92630 601 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 DLX4Q92988 240 aaPredicted RBP2.2□□□□□ -2.06
SKP1-204ENST00000517691 ARL11Q969Q4 196 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 FLYWCH2Q96CP2 140 aaKnown RBP2.2□□□□□ -2.06
SKP1-204ENST00000517691 C1orf147Q96MC9 270 aaPredicted RBP2.2□□□□□ -2.06
SKP1-204ENST00000517691 ZNF714Q96N38 554 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 RNF2Q99496 336 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 SUCNR1Q9BXA5 334 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 ATG5Q9H1Y0 275 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 KLK15Q9H2R5 256 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 C12orf4Q9NQ89 552 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 KCNIP1Q9NZI2 227 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 RAB22AQ9UL26 194 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 LINC00312Q9Y6C7 94 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 NSD1Q96L73 2696 aaPredicted RBP2.2□□□□□ -2.06
SKP1-204ENST00000517691 MXRA5Q9NR99 2828 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 TMEM272A0A1B0GTI8 110 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 MDFIC2A0A1B0GVS7 189 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 PSMB11A5LHX3 300 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 CCDC160A6NGH7 325 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 C17orf98A8MV24 154 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 TMEM14DPA8MWL7 114 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 H3BMQ9 156 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 SDCBPO00560 298 aaPredicted RBP2.2□□□□□ -2.06
SKP1-204ENST00000517691 HSD17B6O14756 317 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 NPFFO15130 113 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 TGOLN2O43493 480 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 MMP23AO75900 390 aa2.2□□□□□ -2.06
SKP1-204ENST00000517691 MT-ND4P03905 459 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms