RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 MED9Q9NWA0 146 aa0.67□□□□□ -2.3
RNU6-1041P-201ENST00000516254 COQ4Q9Y3A0 265 aa0.67□□□□□ -2.3
RNU6-1041P-201ENST00000516254 FLT4P35916 1363 aa0.67□□□□□ -2.3
RNU6-1041P-201ENST00000516254 COL4A1P02462 1669 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 RGS12O14924 1447 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 A0A0D9SEW6 157 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 TRBV10-2A0A0K0K1G8 114 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 TMEM269A0A1B0GVZ9 245 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 TRAPPC13A5PLN9 417 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 MEIS3P1A6NDR6 274 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 OR51F1A6NGY5 319 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 SLC22A1O15245 554 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 MRPS14O60783 128 aaKnown RBP0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 PGLYRP1O75594 196 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 CALB1P05937 261 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 METTL15P1P0C7V9 234 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 ZNF705DP0CH99 300 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 ZNF705BP0CI00 300 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 SULT1A3P0DMM9 295 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 SULT1A4P0DMN0 295 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 CCL1P22362 96 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 S100A7P31151 101 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 RPL28P46779 137 aaKnown RBP0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 IFITM2Q01629 132 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 STX5Q13190 355 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 COQ5Q5HYK3 327 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 IBA57Q5T440 356 aaKnown RBP0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 PTRHD1Q6GMV3 140 aaKnown RBP0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 C1orf158Q8N1D5 194 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 MCFD2Q8NI22 146 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 CNBD2Q96M20 576 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 OR52E6Q96RD3 313 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 MRPL32Q9BYC8 188 aaKnown RBP0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 NOSIPQ9Y314 301 aaKnown RBP0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 RBM7Q9Y580 266 aaKnown RBP0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 SMARCA4P51532 1647 aa0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 SCAF11Q99590 1463 aaKnown RBP0.66□□□□□ -2.3
RNU6-1041P-201ENST00000516254 EVC2Q86UK5 1308 aa0.65□□□□□ -2.3
RNU6-1041P-201ENST00000516254 MUC6Q6W4X9 2439 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 IGKV2-40A0A087WW87 121 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 FUOMA2VDF0 154 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 A8MUN3 132 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 H3BT86 120 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 I3L521 148 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 SDCBPO00560 298 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 LEPROTO15243 131 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 CIAO1O76071 339 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 NSA2O95478 260 aaKnown RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 IGKV2D-40P01614 121 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 IGHV3-7P01780 117 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 REG1AP05451 166 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 RPSAP08865 295 aaKnown RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 CD79AP11912 226 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 CCL5P13501 91 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 GPX2P18283 190 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 RPS12P25398 132 aaKnown RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 MAP2K4P45985 399 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 NKX2-5P52952 324 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 UBE2IP63279 158 aaKnown RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 CCL20P78556 96 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 RPL18Q07020 188 aaKnown RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 GRK1Q15835 563 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 NNATQ16517 81 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 KRTAP21-2Q3LI59 83 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 TMEM155Q4W5P6 130 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 SAPCD1Q5SSQ6 148 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 Q6ZSA8 131 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 C7orf65Q6ZTY9 151 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 SLC36A1Q7Z2H8 476 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 LRRC25Q8N386 305 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 OR1M1Q8NGA1 313 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 ACOT12Q8WYK0 555 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 C11orf40Q8WZ69 217 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 IMP4Q96G21 291 aaKnown RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 HSPB9Q9BQS6 159 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 OR51I1Q9H343 314 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 PARVGQ9HBI0 331 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 NAT8Q9UHE5 227 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 FUT9Q9Y231 359 aa0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 SOX21Q9Y651 276 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1041P-201ENST00000516254 TRPM6Q9BX84 2022 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 TRBV20OR9-2A0A075B6H5 130 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 IGKV3D-7A0A0C4DH55 119 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 IGKV3OR2-268A0A0C4DH90 116 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 TRBV6-5A0A0K0K1A5 114 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 GGT3PA6NGU5 568 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 FABP5P3A8MUU1 101 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 PSMD12O00232 456 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 TGOLN2O43493 480 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 ORC5O43913 435 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 ZNF737O75373 536 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 IFNA5P01569 189 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 PPBPP02775 128 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 PRM2P04554 102 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 TFPTP0C1Z6 253 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 TRGC1P0CF51 173 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 HIST1H1EP10412 219 aaKnown RBP0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 SULT1A1P50225 295 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 CEBPGP53567 150 aa0.64□□□□□ -2.31
RNU6-1041P-201ENST00000516254 PSME3P61289 254 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms