RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 PEMTQ9UBM1 199 aa13.61□□□□□ -0.23
TRIM41-207ENST00000515223 ZNF646O15015 1829 aaPredicted RBP13.61□□□□□ -0.23
TRIM41-207ENST00000515223 PPP1R17O96001 155 aa13.61□□□□□ -0.23
TRIM41-207ENST00000515223 MEIG1Q5JSS6 88 aa13.61□□□□□ -0.23
TRIM41-207ENST00000515223 TCF24Q7RTU0 167 aa13.61□□□□□ -0.23
TRIM41-207ENST00000515223 OSR1Q8TAX0 266 aaPredicted RBP13.61□□□□□ -0.23
TRIM41-207ENST00000515223 G6PC2Q9NQR9 355 aa13.61□□□□□ -0.23
TRIM41-207ENST00000515223 H7C1H1 209 aa13.61□□□□□ -0.23
TRIM41-207ENST00000515223 MEF2BQ02080 365 aaPredicted RBP13.6□□□□□ -0.23
TRIM41-207ENST00000515223 CLDND2Q8NHS1 167 aa13.6□□□□□ -0.23
TRIM41-207ENST00000515223 MRPL32Q9BYC8 188 aaKnown RBP13.6□□□□□ -0.23
TRIM41-207ENST00000515223 PRSS2P07478 247 aa13.6□□□□□ -0.23
TRIM41-207ENST00000515223 EGR4Q05215 589 aa13.6□□□□□ -0.23
TRIM41-207ENST00000515223 SAPCD1Q5SSQ6 148 aa13.6□□□□□ -0.23
TRIM41-207ENST00000515223 ZG16O60844 167 aa13.6□□□□□ -0.23
TRIM41-207ENST00000515223 ZNF708P17019 499 aa13.6□□□□□ -0.23
TRIM41-207ENST00000515223 PPP1R27Q86WC6 154 aa13.6□□□□□ -0.23
TRIM41-207ENST00000515223 SELENOHQ8IZQ5 122 aaKnown RBP13.6□□□□□ -0.23
TRIM41-207ENST00000515223 SRSF12Q8WXF0 261 aaKnown RBP13.6□□□□□ -0.23
TRIM41-207ENST00000515223 SNRNP200O75643 2136 aaKnown RBP13.6□□□□□ -0.23
TRIM41-207ENST00000515223 NPBWR2P48146 333 aa13.6□□□□□ -0.23
TRIM41-207ENST00000515223 FAM3BP58499 235 aaPredicted RBP13.6□□□□□ -0.23
TRIM41-207ENST00000515223 FBXL7Q9UJT9 491 aa13.6□□□□□ -0.23
TRIM41-207ENST00000515223 CACNA1EQ15878 2313 aa13.6□□□□□ -0.23
TRIM41-207ENST00000515223 CXorf65A6NEN9 183 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 MRAP2Q96G30 205 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 IGKV1D-33P01593 117 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 IGKV1-33P01594 117 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 ZNF25P17030 456 aaPredicted RBP13.59□□□□□ -0.23
TRIM41-207ENST00000515223 SRSF3P84103 164 aaKnown RBP13.59□□□□□ -0.23
TRIM41-207ENST00000515223 MEF2CQ06413 473 aaPredicted RBP13.59□□□□□ -0.23
TRIM41-207ENST00000515223 ACP7Q6ZNF0 438 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 ZIC4Q8N9L1 334 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 TP53RKQ96S44 253 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 IGHV2OR16-5A0A0B4J2B6 119 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 RBFOX2O43251 390 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRIM41-207ENST00000515223 GATAD1Q8WUU5 269 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 TMEM101Q96IK0 257 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 CDKN1AP38936 164 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 IGHV3OR16-13A0A075B7E8 117 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 IGHV3-74A0A0B4J1X5 117 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 LGALS3P17931 250 aaKnown RBP13.59□□□□□ -0.23
TRIM41-207ENST00000515223 NRN1LQ496H8 165 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 FBXL15Q9H469 300 aa13.59□□□□□ -0.23
TRIM41-207ENST00000515223 TDRD6O60522 2096 aaKnown RBP13.58□□□□□ -0.23
TRIM41-207ENST00000515223 RNF222A6NCQ9 220 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 C17orf100A8MU93 164 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 HLA-DQA1P01909 254 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 PEAR1Q5VY43 1037 aaPredicted RBP13.58□□□□□ -0.24
TRIM41-207ENST00000515223 PRSS22Q9GZN4 317 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 CBLN4Q9NTU7 201 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 OR4A47Q6IF82 309 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 DRAM1Q8N682 238 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 TMEM70Q9BUB7 260 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 A0A1W2PRX2 142 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 M0QZK8 103 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 C9JCJ5 164 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 ZNF385CQ66K41 422 aaPredicted RBP13.58□□□□□ -0.24
TRIM41-207ENST00000515223 SLC25A28Q96A46 364 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 PGLYRP4Q96LB8 373 aa13.58□□□□□ -0.24
TRIM41-207ENST00000515223 SPACA3Q8IXA5 215 aa13.57□□□□□ -0.24
TRIM41-207ENST00000515223 VKORC1L1Q8N0U8 176 aa13.57□□□□□ -0.24
TRIM41-207ENST00000515223 FOXI3A8MTJ6 420 aaPredicted RBP13.57□□□□□ -0.24
TRIM41-207ENST00000515223 HINT1P49773 126 aaPredicted RBP13.57□□□□□ -0.24
TRIM41-207ENST00000515223 SUMO2P61956 95 aaKnown RBP13.57□□□□□ -0.24
TRIM41-207ENST00000515223 SAMD13Q5VXD3 122 aa13.57□□□□□ -0.24
TRIM41-207ENST00000515223 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.57□□□□□ -0.24
TRIM41-207ENST00000515223 SPSB4Q96A44 273 aa13.57□□□□□ -0.24
TRIM41-207ENST00000515223 RNASE1P07998 156 aaKnown RBP13.57□□□□□ -0.24
TRIM41-207ENST00000515223 HTN3P15516 51 aa13.57□□□□□ -0.24
TRIM41-207ENST00000515223 POC1AQ8NBT0 407 aa13.57□□□□□ -0.24
TRIM41-207ENST00000515223 NABP2Q9BQ15 211 aa13.57□□□□□ -0.24
TRIM41-207ENST00000515223 ZIC3O60481 467 aa13.57□□□□□ -0.24
TRIM41-207ENST00000515223 CD69Q07108 199 aa13.57□□□□□ -0.24
TRIM41-207ENST00000515223 LBHQ53QV2 105 aaPredicted RBP13.57□□□□□ -0.24
TRIM41-207ENST00000515223 J3QRE1 110 aa13.57□□□□□ -0.24
TRIM41-207ENST00000515223 C21orf62Q9NYP8 219 aa13.57□□□□□ -0.24
TRIM41-207ENST00000515223 E9PLN8 166 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 LY6DQ14210 128 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 GOLT1AQ6ZVE7 132 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 FAM216BQ8N7L0 139 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 ARPC1AQ92747 370 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 VKORC1Q9BQB6 163 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 GPR61Q9BZJ8 451 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 MRPS18CQ9Y3D5 142 aaKnown RBP13.56□□□□□ -0.24
TRIM41-207ENST00000515223 TNFRSF18Q9Y5U5 241 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 DIRC3C9JPN6 131 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 MYOD1P15172 320 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 UCP3P55916 312 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 MBNL2Q5VZF2 373 aaKnown RBP13.56□□□□□ -0.24
TRIM41-207ENST00000515223 IMMP1LQ96LU5 166 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 PRR32B1ATL7 298 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 MOSP00540 346 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 C8orf46Q8TAG6 207 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 GFI1Q99684 422 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 H7C2G1 150 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 VDAC2P45880 294 aaPredicted RBP13.56□□□□□ -0.24
TRIM41-207ENST00000515223 SMIM8Q96KF7 97 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 DUX3Q96PT4 197 aa13.56□□□□□ -0.24
TRIM41-207ENST00000515223 PQLC2LA1A4F0 135 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms