RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 OR14A2Q96R54 314 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 HDHD3Q9BSH5 251 aaPredicted RBP2.22□□□□□ -2.05
CHD1-211ENST00000514344 C1QTNF4Q9BXJ3 329 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 PAK1IP1Q9NWT1 392 aaPredicted RBP2.22□□□□□ -2.05
CHD1-211ENST00000514344 TRAV14DV4A0A0A6YYC5 116 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 TEX48A0A1B0GUV7 120 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 LOC102723971A0A1B0GUV8 181 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 DAPL1A0PJW8 107 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 DBX1A6NMT0 343 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 ZNF705FA8MVS1 300 aaPredicted RBP2.22□□□□□ -2.05
CHD1-211ENST00000514344 GPX5O75715 221 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 SULT1C4O75897 302 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 PRM2P04554 102 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 HTR1AP08908 422 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 ZNF705DP0CH99 300 aaPredicted RBP2.22□□□□□ -2.05
CHD1-211ENST00000514344 ZNF705BP0CI00 300 aaPredicted RBP2.22□□□□□ -2.05
CHD1-211ENST00000514344 ZBTB25P24278 435 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 RPL27AP46776 148 aaKnown RBP2.22□□□□□ -2.05
CHD1-211ENST00000514344 HNRNPA3P51991 378 aaKnown RBP2.22□□□□□ -2.05
CHD1-211ENST00000514344 FCN2Q15485 313 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 HMGN3Q15651 99 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 ESRGQ1W209 222 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 DDI2Q5TDH0 399 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 SIGIRRQ6IA17 410 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 CD300LDQ6UXZ3 194 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 ZNF705AQ6ZN79 300 aaPredicted RBP2.22□□□□□ -2.05
CHD1-211ENST00000514344 ZNF554Q86TJ5 538 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 MMD2Q8IY49 270 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 CBR4Q8N4T8 237 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 ZFP41Q8N8Y5 198 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 GLMPQ8WWB7 406 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 MAFIPQ8WZ33 124 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 ST8SIA2Q92186 375 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 FCGR1BQ92637 280 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 MUL1Q969V5 352 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 C4orf36Q96KX1 117 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 HINT2Q9BX68 163 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 OR2D2Q9H210 308 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 RFNGQ9Y644 331 aa2.22□□□□□ -2.05
CHD1-211ENST00000514344 A0A075B6Q4 140 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 A0A0J9YY99 117 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 LINC00473A8K010 186 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 E9PI62 339 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 K7EMT4 169 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 BET1O15155 118 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 CA11O75493 328 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 SC5DO75845 299 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 IGLV2-8P01709 118 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 EIF4EP06730 217 aaKnown RBP2.21□□□□□ -2.06
CHD1-211ENST00000514344 FCER2P06734 321 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 OR2T7P0C7T2 308 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 OSMP13725 252 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 PTBP1P26599 531 aaKnown RBP eCLIP2.21□□□□□ -2.06
CHD1-211ENST00000514344 CAPGP40121 348 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 MS4A2Q01362 244 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 PSMG4Q5JS54 123 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 LY6G6FQ5SQ64 297 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 AWAT2Q6E213 333 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 XAF1Q6GPH4 301 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 C6orf201Q7Z4U5 140 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 CROCCP2Q86T23 111 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 PARP16Q8N5Y8 322 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 CANT1Q8WVQ1 401 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 BSCL2Q96G97 398 aaPredicted RBP2.21□□□□□ -2.06
CHD1-211ENST00000514344 ZNF184Q99676 751 aaPredicted RBP2.21□□□□□ -2.06
CHD1-211ENST00000514344 FAAP24Q9BTP7 215 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 MAGT1Q9H0U3 335 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 ARL8BQ9NVJ2 186 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 SDHAF2Q9NX18 166 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 SPATA2Q9UM82 520 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 PUS1Q9Y606 427 aaKnown RBP eCLIP2.21□□□□□ -2.06
CHD1-211ENST00000514344 A6NJY4 79 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 OR4C45A6NMZ5 311 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 CREBL2O60519 120 aaPredicted RBP2.21□□□□□ -2.06
CHD1-211ENST00000514344 ZNF780AO75290 641 aaPredicted RBP2.21□□□□□ -2.06
CHD1-211ENST00000514344 CRYGCP07315 174 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 HIST1H1BP16401 226 aaKnown RBP2.21□□□□□ -2.06
CHD1-211ENST00000514344 CRHBPP24387 322 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 SNRPGP62308 76 aaKnown RBP2.21□□□□□ -2.06
CHD1-211ENST00000514344 OR5I1Q13606 314 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 OXA1LQ15070 435 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 CDK10Q15131 360 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 LINC01620Q4KN68 170 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 Q56UQ5 140 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 SCXQ7RTU7 201 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 SPATA24Q86W54 205 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 RAB40CQ96S21 281 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 JAM3Q9BX67 310 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 RIBC2Q9H4K1 309 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 THYN1Q9P016 225 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 ARL2BPQ9Y2Y0 163 aa2.21□□□□□ -2.06
CHD1-211ENST00000514344 hCG_2014768A0A024R1R8 64 aa2.2□□□□□ -2.06
CHD1-211ENST00000514344 TRAV26-1A0A087WT03 109 aa2.2□□□□□ -2.06
CHD1-211ENST00000514344 FAM107AO95990 144 aa2.2□□□□□ -2.06
CHD1-211ENST00000514344 HBE1P02100 147 aa2.2□□□□□ -2.06
CHD1-211ENST00000514344 GLAP06280 429 aa2.2□□□□□ -2.06
CHD1-211ENST00000514344 MGMTP16455 207 aa2.2□□□□□ -2.06
CHD1-211ENST00000514344 IGFBP3P17936 291 aaPredicted RBP2.2□□□□□ -2.06
CHD1-211ENST00000514344 RASSF2P50749 326 aa2.2□□□□□ -2.06
CHD1-211ENST00000514344 DEFB1P60022 68 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms