RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 CFC1BP0CG36 223 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 CFC1P0CG37 223 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 SLC25A4P12235 298 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 SLC25A6P12236 298 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 RCC1P18754 421 aaPredicted RBP3.62□□□□□ -1.83
CLDND1-228ENST00000513873 CXCL3P19876 107 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 VDAC1P21796 283 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 IL3RAP26951 378 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 S100A11P31949 105 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 OR3A1P47881 315 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 TMEM33P57088 247 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 CCL8P80075 99 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 AESQ08117 197 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 BAMBIQ13145 260 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 EDDM3AQ14507 147 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 IAH1Q2TAA2 248 aaPredicted RBP3.62□□□□□ -1.83
CLDND1-228ENST00000513873 PHLDA2Q53GA4 152 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 STUMQ69YW2 141 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 ZNF660Q6AZW8 331 aaPredicted RBP3.62□□□□□ -1.83
CLDND1-228ENST00000513873 ACOT7LQ6ZUV0 252 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 Q71RC1 249 aaPredicted RBP3.62□□□□□ -1.83
CLDND1-228ENST00000513873 BATF2Q8N1L9 274 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 ZNF645Q8N7E2 425 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.62□□□□□ -1.83
CLDND1-228ENST00000513873 ADAD2Q8NCV1 583 aaKnown RBP3.62□□□□□ -1.83
CLDND1-228ENST00000513873 OR52B4Q8NGK2 314 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 ANGPTL6Q8NI99 470 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 LINC01560Q8TB33 94 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 LRRC20Q8TCA0 184 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 CORO2AQ92828 525 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 RBPMSQ93062 196 aaKnown RBP3.62□□□□□ -1.83
CLDND1-228ENST00000513873 C18orf12Q96KH6 178 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 TMEM56Q96MV1 263 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 YPEL2Q96QA6 119 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 S1PR3Q99500 378 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 MFFQ9GZY8 342 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 SLC25A31Q9H0C2 315 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 TOLLIPQ9H0E2 274 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 FXYD6Q9H0Q3 95 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 TMEM222Q9H0R3 208 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 GSKIPQ9P0R6 139 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 PIPOXQ9P0Z9 390 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 MIOXQ9UGB7 285 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 MAB21L2Q9Y586 359 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 LINC00312Q9Y6C7 94 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 TMEM56-RWDD3S4R434 201 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.62□□□□□ -1.838e-16■■■■■ 31.6
CLDND1-228ENST00000513873 HRNRQ86YZ3 2850 aaPredicted RBP3.62□□□□□ -1.83
CLDND1-228ENST00000513873 DOCK10Q96BY6 2186 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 MGAM2Q2M2H8 2515 aa3.62□□□□□ -1.83
CLDND1-228ENST00000513873 IGKV1D-17A0A075B6S4 117 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 IGKV1D-8A0A087WSZ0 117 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 BORCS7-ASMTA0A0B4J1R7 106 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 IGHV3-64DA0A0J9YX35 117 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 KBTBD11-OT1A0A1B0GTJ5 212 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 A0A1B0GU03 582 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 C12orf77C9JDV5 145 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 E5RGE8 158 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 HSD17B6O14756 317 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 RAB29O14966 203 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 ST8SIA3O43173 380 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 ADAM20O43506 726 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 TSC22D2O75157 780 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 ZNF737O75373 536 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 PGLYRP1O75594 196 aaPredicted RBP3.61□□□□□ -1.83
CLDND1-228ENST00000513873 CYB5R3P00387 301 aaPredicted RBP3.61□□□□□ -1.83
CLDND1-228ENST00000513873 TSHBP01222 138 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 GYPAP02724 150 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 OR5AC1P0C628 307 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 OR8U9P0C7N5 309 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 RRASP10301 218 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 F2RP25116 425 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 CD80P33681 288 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 AKR1C2P52895 323 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 PRRX1P54821 245 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 H2BFSP57053 126 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 ERVK-16P61578 105 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 RPL31P62899 125 aaKnown RBP3.61□□□□□ -1.83
CLDND1-228ENST00000513873 ZNF345Q14585 488 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 TMEM155Q4W5P6 130 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 GPR157Q5UAW9 335 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 PRSS54Q6PEW0 395 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 C17orf107Q6ZR85 190 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 NCCRP1Q6ZVX7 275 aaPredicted RBP3.61□□□□□ -1.83
CLDND1-228ENST00000513873 SLC51BQ86UW2 128 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 FAM71E2Q8N5Q1 922 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 CD177Q8N6Q3 437 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 DEFB108BQ8NET1 73 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 OR8H1Q8NGG4 311 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 OR8B3Q8NGG8 313 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 OR8U1Q8NH10 309 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 PLPPR1Q8TBJ4 325 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 MRGPRDQ8TDS7 321 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 PPP1R1CQ8WVI7 109 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 DCUN1D4Q92564 292 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 DYRK2Q92630 601 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 TNFRSF14Q92956 283 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 LSM10Q969L4 123 aaKnown RBP3.61□□□□□ -1.83
CLDND1-228ENST00000513873 PHYHIPLQ96FC7 376 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 OR8B2Q96RD0 313 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms