RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 FANCD2OSQ96PS1 177 aa7.46□□□□□ -1.22
RNF4-221ENST00000513643 SRSF8Q9BRL6 282 aaKnown RBP7.46□□□□□ -1.22
RNF4-221ENST00000513643 WI2-2373I1.2A0A1W2PRP0 233 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 IGLC7A0M8Q6 106 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 HMX3A6NHT5 357 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 RGS5O15539 181 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 ACTL6BO94805 426 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 IGHV3-11P01762 117 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 P0C879 139 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 MYOD1P15172 320 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 AREGP15514 252 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 HOXD3P31249 432 aaPredicted RBP7.45□□□□□ -1.22
RNF4-221ENST00000513643 LPAR6P43657 344 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 RPL27AP46776 148 aaKnown RBP7.45□□□□□ -1.22
RNF4-221ENST00000513643 SLURP1P55000 103 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 TAS2R19P59542 299 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 TSPAN5P62079 268 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 RNASE10Q5GAN6 216 aaKnown RBP7.45□□□□□ -1.22
RNF4-221ENST00000513643 C9orf66Q5T8R8 295 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 ACSM6Q6P461 480 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 SSX9Q7RTT3 188 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 DIRAS2Q96HU8 199 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 SEC22AQ96IW7 307 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 RANGRFQ9HD47 186 aaPredicted RBP7.45□□□□□ -1.22
RNF4-221ENST00000513643 AKIP1Q9NQ31 210 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 TMEM140Q9NV12 185 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 ZNF257Q9Y2Q1 563 aa7.45□□□□□ -1.22
RNF4-221ENST00000513643 IGLV11-55A0A075B6I3 123 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.44□□□□□ -1.22
RNF4-221ENST00000513643 TEX50A0A1B0GTY4 177 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 FAM223BA6NKX1 122 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 MARCH11A6NNE9 402 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 SEC14L6B5MCN3 397 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 OVOL1O14753 267 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 MPPED1O15442 326 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 TRBV12-3P01733 135 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 APELAP0DMC3 54 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 PSMB6P28072 239 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 RHOGP84095 191 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 PHLDA2Q53GA4 152 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 STEAP1BQ6NZ63 245 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 TBC1D26Q86UD7 250 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 ZNF429Q86V71 674 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 SLC25A42Q86VD7 318 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 FAM223AQ8IWN6 122 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 NECAP1Q8NC96 275 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 FYTTD1Q96QD9 318 aaKnown RBP7.44□□□□□ -1.22
RNF4-221ENST00000513643 NDUFA4L2Q9NRX3 87 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 TMEM14BQ9NUH8 114 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 SLC2A8Q9NY64 477 aa7.44□□□□□ -1.22
RNF4-221ENST00000513643 PEF1Q9UBV8 284 aaKnown RBP7.44□□□□□ -1.22
RNF4-221ENST00000513643 LSM4Q9Y4Z0 139 aaKnown RBP7.44□□□□□ -1.22
RNF4-221ENST00000513643 C13orf42A0A1B0GVH6 325 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 ANKRD20A5PA0PJZ0 165 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 RAB3DO95716 219 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 PRH1P02810 166 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 ZP3P21754 424 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 MECP2P51608 486 aaKnown RBP7.43□□□□□ -1.22
RNF4-221ENST00000513643 DEFA5Q01523 94 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 SURF2Q15527 256 aaPredicted RBP7.43□□□□□ -1.22
RNF4-221ENST00000513643 RNASE12Q5GAN4 147 aaKnown RBP7.43□□□□□ -1.22
RNF4-221ENST00000513643 C19orf35Q6ZS72 473 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 CCDC190Q86UF4 302 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 OR13C8Q8NGS7 320 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 MCFD2Q8NI22 146 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 DPF1Q92782 380 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 PHB2Q99623 299 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 RTBDNQ9BSG5 229 aaPredicted RBP7.43□□□□□ -1.22
RNF4-221ENST00000513643 C6orf62Q9GZU0 229 aaPredicted RBP7.43□□□□□ -1.22
RNF4-221ENST00000513643 ZNF355PQ9NSJ1 428 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 COA4Q9NYJ1 87 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 SIGLEC8Q9NYZ4 499 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 ZMAT5Q9UDW3 170 aaKnown RBP7.43□□□□□ -1.22
RNF4-221ENST00000513643 RSL24D1Q9UHA3 163 aaKnown RBP7.43□□□□□ -1.22
RNF4-221ENST00000513643 V9GYH0 126 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 STAB2Q8WWQ8 2551 aa7.43□□□□□ -1.22
RNF4-221ENST00000513643 FABP12A6NFH5 140 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 DBX1A6NMT0 343 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 H0Y980 276 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 BMPR1BO00238 502 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 NDUFB8O95169 186 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 KRASP01116 189 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 IFNA6P05013 189 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 CTSDP07339 412 aaPredicted RBP7.42□□□□□ -1.22
RNF4-221ENST00000513643 RPA2P15927 270 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 PI3P19957 117 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 G6PCP35575 357 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 ETV6P41212 452 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 PIGPP57054 158 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 RAB25P57735 213 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 ATP5G2Q06055 141 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 WT1-ASQ06250 92 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 IL18Q14116 193 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 MEF2DQ14814 521 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 FAM209BQ5JX69 171 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 THOC7Q6I9Y2 204 aaKnown RBP7.42□□□□□ -1.22
RNF4-221ENST00000513643 HSD17B13Q7Z5P4 300 aaPredicted RBP7.42□□□□□ -1.22
RNF4-221ENST00000513643 DMBX1Q8NFW5 382 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 OR4C16Q8NGL9 310 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 OR5B3Q8NH48 314 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms