RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 TPM4P67936 248 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 TNFAIP8L2Q6P589 184 aaPredicted RBP0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 FAM151BQ6UXP7 276 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 Q8N402 240 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 SLC37A2Q8TED4 501 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 KCTD7Q96MP8 289 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 LLPHQ9BRT6 129 aaKnown RBP0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 HES4Q9HCC6 221 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 C15orf41Q9Y2V0 281 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 ATP6V1DQ9Y5K8 247 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 ARFGEF3Q5TH69 2177 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 A0A1B0GW54 56 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 TMEM212A6NML5 194 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 COX7A2LO14548 114 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 COCHO43405 550 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 APOEP02649 317 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 IL6P05231 212 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 OCM2P0CE71 109 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 DDTP30046 118 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 MAGEA2P43356 314 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 RPS24P62847 133 aaKnown RBP0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 COTL1Q14019 142 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 TMEM156Q8N614 296 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 C12orf29Q8N999 325 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 ZNF565Q8N9K5 539 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 JOSD2Q8TAC2 188 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 ANKRD36BP1Q96IX9 119 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 CCL13Q99616 98 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 DRC3Q9H069 523 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 TRABDQ9H4I3 376 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 NKIRAS1Q9NYS0 192 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 USE1Q9NZ43 259 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 TIMM22Q9Y584 194 aa0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 DICER1Q9UPY3 1922 aaKnown RBP0.71□□□□□ -2.3
TRAPPC11-210ENST00000513600 ABCC11Q96J66 1382 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 TRAV14DV4A0A0A6YYC5 116 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 PFDN6O15212 129 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 SLC16A4O15374 487 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 HLA-DRAP01903 254 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 IL3P08700 152 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 COX5BP10606 129 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 CDC34P49427 236 aaPredicted RBP0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 CXCR4P61073 352 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 MLLT11Q13015 90 aaPredicted RBP0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 NDUFA5Q16718 116 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 CST9Q5W186 159 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 TBC1D19Q8N5T2 526 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 ZNF439Q8NDP4 499 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 OR5B17Q8NGF7 314 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 GNPNAT1Q96EK6 184 aaPredicted RBP0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 ERMAPQ96PL5 475 aaPredicted RBP0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 DERL2Q9GZP9 239 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 HRASLSQ9HDD0 168 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 POLR1DQ9Y2S0 133 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 NOSIPQ9Y314 301 aaKnown RBP0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 RP1P56715 2156 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 MAP3K5Q99683 1374 aa0.7□□□□□ -2.3
TRAPPC11-210ENST00000513600 CACNA1BQ00975 2339 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 BRWD1Q9NSI6 2320 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 LRRN3E7EW58 273 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 M0QZ92 97 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 CXCR6O00574 342 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 DEXIO95424 95 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 KRT75O95678 551 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 TYMSP04818 313 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 MSMBP08118 114 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 CCL5P13501 91 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 MAGOHP61326 146 aaKnown RBP0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 OGFRL1Q5TC84 451 aaPredicted RBP0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 FAM78BQ5VT40 261 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 LRRN1Q6UXK5 716 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 IQCF2Q8IXL9 164 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 TMEM161BQ8NDZ6 487 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 PIGXQ8TBF5 258 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 HAVCR2Q8TDQ0 301 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 EEF1AKMT1Q8WVE0 214 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 MAP1LC3AQ9H492 121 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 FGFR1OP2Q9NVK5 253 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 LHFPL6Q9Y693 200 aa0.69□□□□□ -2.3
TRAPPC11-210ENST00000513600 DISC1C4P0D8 188 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 H0Y980 276 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 TRAPPC2LH3BP13 241 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 APOMO95445 188 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 NSA2O95478 260 aaKnown RBP0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 KRT7P08729 469 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 MYL12AP19105 171 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 RPL12P30050 165 aaKnown RBP0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 BLVRAP53004 296 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 PPP1R1AQ13522 171 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 BATFQ16520 125 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 CDKL4Q5MAI5 379 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 C9orf84Q5VXU9 1444 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 TEX36Q5VZQ5 186 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 SBSNQ6UWP8 590 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 SLC51BQ86UW2 128 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 DHFR2Q86XF0 187 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 UBL4BQ8N7F7 174 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 DDI1Q8WTU0 396 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 RAB8BQ92930 207 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 ARL5BQ96KC2 179 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms