RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SCN8AQ9UQD0 1980 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 MTCL1Q9Y4B5 1905 aaKnown RBP9.55□□□□□ -0.88
TCOF1-211ENST00000513346 SCO2A0A1W2PP80 73 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 ZNF324O75467 553 aaPredicted RBP9.55□□□□□ -0.88
TCOF1-211ENST00000513346 LIPFP07098 398 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 SPSB3Q6PJ21 355 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 C5orf17Q8NAS9 161 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 J3QR06 171 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 NPSP0C0P6 89 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 COX6A1P12074 109 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 PRRX1P54821 245 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 FOXL1Q12952 345 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 SAMD13Q5VXD3 122 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 PNKDQ8N490 385 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 ZNF441Q8N8Z8 693 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 VSIRQ9H7M9 311 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 RNF7Q9UBF6 113 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 FREM3P0C091 2139 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 TCTAP57738 103 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 TFF3Q07654 80 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 GAGE1Q13065 139 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 PCOLCEQ15113 449 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 Q1RN00 199 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 C1orf185Q5T7R7 199 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 FAM90A2PQ658T7 463 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 DRAM1Q8N682 238 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 PERPQ96FX8 193 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 WNT5BQ9H1J7 359 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 CEACAM18A8MTB9 384 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 AHRRA9YTQ3 701 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 NAPSAO96009 420 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 CCL1P22362 96 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 GCSHP23434 173 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 C10orf128Q5T292 105 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 CDCP2Q5VXM1 449 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 UNQ5815/PRO19632Q6UWF5 114 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 TMEM116Q8NCL8 245 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 FLYWCH2Q96CP2 140 aaKnown RBP9.54□□□□□ -0.88
TCOF1-211ENST00000513346 WBP1Q96G27 269 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 CHRNA10Q9GZZ6 450 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 LINC00271P0C7V0 271 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 CEACAM3P40198 252 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 NUDT10Q8NFP7 164 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 SSBP3Q9BWW4 388 aaPredicted RBP9.54□□□□□ -0.88
TCOF1-211ENST00000513346 RTN4RQ9BZR6 473 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 POLR3KQ9Y2Y1 108 aaPredicted RBP9.54□□□□□ -0.88
TCOF1-211ENST00000513346 RPL13AP40429 203 aaKnown RBP9.54□□□□□ -0.88
TCOF1-211ENST00000513346 ARF6P62330 175 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 QRFPP83859 136 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 ATP1A1-AS1Q5TC04 95 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 AGMATQ9BSE5 352 aa9.54□□□□□ -0.88
TCOF1-211ENST00000513346 CACNA1DQ01668 2161 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 OR2H2O95918 312 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 M0QZ24 198 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 RBP4P02753 201 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 C8orf88P0DMB2 117 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 C1orf174Q8IYL3 243 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 DIRC2Q96SL1 478 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 CREBBPQ92793 2442 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 A0A1W2PRD5 423 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 A0A1W2PRF3 423 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 A0A1W2PRM7 423 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 OR10AG1Q8NH19 301 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 TMEM171Q8WVE6 324 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 SCNM1Q9BWG6 230 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 MEGF9Q9H1U4 602 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 UBTD1Q9HAC8 227 aa9.53□□□□□ -0.88
TCOF1-211ENST00000513346 AMMECR1Q9Y4X0 333 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-211ENST00000513346 A1L4Q6 167 aa9.52□□□□□ -0.88
TCOF1-211ENST00000513346 OR10J3Q5JRS4 329 aa9.52□□□□□ -0.88
TCOF1-211ENST00000513346 Q5PR19 223 aa9.52□□□□□ -0.88
TCOF1-211ENST00000513346 VSTM2AQ8TAG5 236 aa9.52□□□□□ -0.88
TCOF1-211ENST00000513346 GNB1LQ9BYB4 327 aa9.52□□□□□ -0.88
TCOF1-211ENST00000513346 CDPF1Q6NVV7 123 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 NFAM1Q8NET5 270 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-211ENST00000513346 OR1L1Q8NH94 360 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 SFXN3Q9BWM7 321 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 OR51B2Q9Y5P1 312 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 DOPEY2Q9Y3R5 2298 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 THSD7BQ9C0I4 1608 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 ODAMA1E959 279 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 KLRB1Q12918 225 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 FHL1Q13642 323 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 PKIBQ9C010 78 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 AKIRIN1Q9H9L7 192 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-211ENST00000513346 ZNF319Q9P2F9 582 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 SPG11Q96JI7 2443 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 MGAMO43451 1857 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 IGKV1D-13A0A0B4J2D9 117 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 LOC389332A0A1B0GUA5 103 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 IGKV1-13P0DP09 117 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 CA7P43166 264 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 TMEM136Q6ZRR5 245 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 PPP1R32Q7Z5V6 425 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 GATAD1Q8WUU5 269 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 PGLYRP4Q96LB8 373 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 C19orf24Q9BVV8 132 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 CHODLQ9H9P2 273 aa9.52□□□□□ -0.89
TCOF1-211ENST00000513346 C19orf67A6NJJ6 358 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms