RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 DYNLRB2Q8TF09 96 aa10.43□□□□□ -0.74
SPCS3-204ENST00000513139 FCAMRQ8WWV6 532 aa10.43□□□□□ -0.74
SPCS3-204ENST00000513139 CABLES2Q9BTV7 478 aa10.43□□□□□ -0.74
SPCS3-204ENST00000513139 C11orf54Q9H0W9 315 aaPredicted RBP10.43□□□□□ -0.74
SPCS3-204ENST00000513139 RDH8Q9NYR8 311 aa10.43□□□□□ -0.74
SPCS3-204ENST00000513139 ANAPC10Q9UM13 185 aa10.43□□□□□ -0.74
SPCS3-204ENST00000513139 TP53TG1Q9Y2A0 90 aa10.43□□□□□ -0.74
SPCS3-204ENST00000513139 V9GYH0 126 aa10.43□□□□□ -0.74
SPCS3-204ENST00000513139 A0A0J9YWU9 116 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 J3QRK9 145 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 BMPR1BO00238 502 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 SULT1C2O00338 296 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 PMP2P02689 132 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 NAT1P18440 290 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 NFYAP23511 347 aaPredicted RBP10.42□□□□□ -0.74
SPCS3-204ENST00000513139 HLA-DMAP28067 261 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 RFX2P48378 723 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 ARPC4P59998 168 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 PDPNQ86YL7 162 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 C15orf40Q8WUR7 153 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 ABHD14BQ96IU4 210 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 GINS4Q9BRT9 223 aa10.42□□□□□ -0.74
SPCS3-204ENST00000513139 LOC102724200A0A096LPH7 203 aaPredicted RBP10.41□□□□□ -0.74
SPCS3-204ENST00000513139 GABARAPH6UMI1 98 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 PROP1O75360 226 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 CTXN2P0C2S0 81 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 VAMP1P23763 118 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 BMI1P35226 326 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 DEFA5Q01523 94 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 EWSR1Q01844 656 aaKnown RBP eCLIP10.41□□□□□ -0.74
SPCS3-204ENST00000513139 PYDC2Q56P42 97 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 FAM209BQ5JX69 171 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 LYG2Q86SG7 212 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 H1FOOQ8IZA3 346 aaPredicted RBP10.41□□□□□ -0.74
SPCS3-204ENST00000513139 OR5AP2Q8NGF4 316 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 COA4Q9NYJ1 87 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 MTFP1Q9UDX5 166 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 VPS13DQ5THJ4 4388 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 PKHD1P08F94 4074 aa10.41□□□□□ -0.74
SPCS3-204ENST00000513139 C2orf70A6NJV1 201 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 FAM223BA6NKX1 122 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 CTDSPLO15194 276 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 RBMXL2O75526 392 aaKnown RBP10.4□□□□□ -0.74
SPCS3-204ENST00000513139 APOA2P02652 100 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 CRYGBP07316 175 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 FOLR2P14207 255 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 FCGR2CP31995 323 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 RCVRNP35243 200 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 HRH1P35367 487 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 ETV6P41212 452 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 PJVKQ0ZLH3 352 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 CDK10Q15131 360 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 ZNF79Q15937 498 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 SPANXN2Q5MJ10 180 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 Q6ZWC4 215 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 FAM223AQ8IWN6 122 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 ZNF383Q8NA42 475 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 DRAXINQ8NBI3 349 aaPredicted RBP10.4□□□□□ -0.74
SPCS3-204ENST00000513139 ADAD2Q8NCV1 583 aaKnown RBP10.4□□□□□ -0.74
SPCS3-204ENST00000513139 SMIM4Q8WVI0 70 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 WDR89Q96FK6 387 aaPredicted RBP10.4□□□□□ -0.74
SPCS3-204ENST00000513139 DNAH6Q9C0G6 4158 aa10.4□□□□□ -0.74
SPCS3-204ENST00000513139 MSGN1A6NI15 193 aa10.39□□□□□ -0.75
SPCS3-204ENST00000513139 M0QYG6 137 aa10.39□□□□□ -0.75
SPCS3-204ENST00000513139 LGALS9O00182 355 aa10.39□□□□□ -0.75
SPCS3-204ENST00000513139 GSTZ1O43708 216 aaPredicted RBP10.39□□□□□ -0.75
SPCS3-204ENST00000513139 DIRAS3O95661 229 aa10.39□□□□□ -0.75
SPCS3-204ENST00000513139 IGLV2-23P01705 113 aa10.39□□□□□ -0.75
SPCS3-204ENST00000513139 CD3DP04234 171 aa10.39□□□□□ -0.75
SPCS3-204ENST00000513139 MRPS10P82664 201 aaKnown RBP10.39□□□□□ -0.75
SPCS3-204ENST00000513139 ANKRD55Q3KP44 614 aa10.39□□□□□ -0.75
SPCS3-204ENST00000513139 OR5H2Q8NGV7 314 aa10.39□□□□□ -0.75
SPCS3-204ENST00000513139 EHFQ9NZC4 300 aa10.39□□□□□ -0.75
SPCS3-204ENST00000513139 PTTG2Q9NZH5 202 aa10.39□□□□□ -0.75
SPCS3-204ENST00000513139 RABL2AQ9UBK7 228 aaPredicted RBP10.39□□□□□ -0.75
SPCS3-204ENST00000513139 RABL2BQ9UNT1 228 aa10.39□□□□□ -0.75
SPCS3-204ENST00000513139 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.38□□□□□ -0.75
SPCS3-204ENST00000513139 TRBV9A0A0B4J1U6 114 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 IGKV1D-13A0A0B4J2D9 117 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 SPRY2O43597 315 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 TUSC2O75896 110 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 OR9G9P0C7N8 305 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 IGKV1-13P0DP09 117 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 LINC00205P59089 165 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 TAS2R46P59540 309 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 RHOGP84095 191 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 EXOSC2Q13868 293 aaKnown RBP10.38□□□□□ -0.75
SPCS3-204ENST00000513139 MFSD4AQ8N468 514 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 TMEM217Q8N7C4 229 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 OR4D10Q8NGI6 311 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 OR52B4Q8NGK2 314 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 AKIP1Q9NQ31 210 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 ZNF221Q9UK13 617 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 RBMX2Q9Y388 322 aaKnown RBP10.38□□□□□ -0.75
SPCS3-204ENST00000513139 OR2W1Q9Y3N9 320 aa10.38□□□□□ -0.75
SPCS3-204ENST00000513139 RBM7Q9Y580 266 aaKnown RBP10.38□□□□□ -0.75
SPCS3-204ENST00000513139 UBE2CO00762 179 aa10.37□□□□□ -0.75
SPCS3-204ENST00000513139 PTBP1P26599 531 aaKnown RBP eCLIP10.37□□□□□ -0.75
SPCS3-204ENST00000513139 ATP5G2Q06055 141 aa10.37□□□□□ -0.75
SPCS3-204ENST00000513139 DHRS11Q6UWP2 260 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms