RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 OR11H12B2RN74 326 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 J3QRK9 145 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 LGALS9O00182 355 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 MRPS14O60783 128 aaKnown RBP5.42□□□□□ -1.54
USP46-208ENST00000512656 RBMXL2O75526 392 aaKnown RBP5.42□□□□□ -1.54
USP46-208ENST00000512656 OR2J3O76001 311 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 PRH1P02810 166 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 HIST1H1BP16401 226 aaKnown RBP5.42□□□□□ -1.54
USP46-208ENST00000512656 NFYAP23511 347 aaPredicted RBP5.42□□□□□ -1.54
USP46-208ENST00000512656 KIR2DS2P43631 304 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 RPL27AP46776 148 aaKnown RBP5.42□□□□□ -1.54
USP46-208ENST00000512656 GNG2P59768 71 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 ZNF45Q02386 682 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 GUCA2BQ16661 112 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 DEFB114Q30KQ6 69 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 ANKRD55Q3KP44 614 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 C22orf42Q6IC83 251 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 OR4A47Q6IF82 309 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 LINC00322Q6ZN03 302 aaPredicted RBP5.42□□□□□ -1.54
USP46-208ENST00000512656 ZNF66Q6ZN08 573 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 TPRA1Q86W33 373 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 GPHB5Q86YW7 130 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 TMEM167AQ8TBQ9 72 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 TCTEX1D2Q8WW35 142 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 NRG4Q8WWG1 115 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 C16orf92Q96LL3 132 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 FYTTD1Q96QD9 318 aaKnown RBP5.42□□□□□ -1.54
USP46-208ENST00000512656 HIPK2Q9H2X6 1198 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 PLEKHA3Q9HB20 300 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 SLC2A9Q9NRM0 540 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 IGKV1D-8A0A087WSZ0 117 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 C2orf70A6NJV1 201 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 TEX22C9J3V5 150 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 ANKRD65E5RJM6 399 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 PPP5D1E7EU14 171 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 CYB5BO43169 146 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 KBTBD11O94819 623 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 OR2C1O95371 312 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 DEFA4P12838 97 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 FOLR2P14207 255 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 ARL3P36405 182 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 ARPC4P59998 168 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 OR2B11Q5JQS5 317 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 C10orf55Q5SWW7 151 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 ZNF575Q86XF7 245 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 VKORC1L1Q8N0U8 176 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 DEFB125Q8N687 156 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 OR4A5Q8NH83 315 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 NUDCD2Q8WVJ2 157 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 EEF1AKMT3Q96AZ1 226 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 CXorf58Q96LI9 332 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 CNBD2Q96M20 576 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 SRD5A3Q9H8P0 318 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 ZC4H2Q9NQZ6 224 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 GAR1Q9NY12 217 aaKnown RBP5.41□□□□□ -1.54
USP46-208ENST00000512656 ANXA10Q9UJ72 324 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 SPATA2Q9UM82 520 aa5.41□□□□□ -1.54
USP46-208ENST00000512656 TRBV7-1A0A0A6YYK4 115 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 ZNF320A2RRD8 509 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 TMEM235A6NFC5 223 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 HMX3A6NHT5 357 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 RBFOX2O43251 390 aaKnown RBP eCLIP5.4□□□□□ -1.54
USP46-208ENST00000512656 CRYGCP07315 174 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 IL6RP08887 468 aaPredicted RBP5.4□□□□□ -1.54
USP46-208ENST00000512656 CD7P09564 240 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 ZNF735P0CB33 412 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 CBLN1P23435 193 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 PSMB6P28072 239 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 FGF9P31371 208 aaPredicted RBP5.4□□□□□ -1.54
USP46-208ENST00000512656 SCAND1P57086 179 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 GABARAPL2P60520 117 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 RPL30P62888 115 aaKnown RBP5.4□□□□□ -1.54
USP46-208ENST00000512656 RPL8P62917 257 aaKnown RBP5.4□□□□□ -1.54
USP46-208ENST00000512656 MSMO1Q15800 293 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 ZNF57Q68EA5 555 aaPredicted RBP5.4□□□□□ -1.54
USP46-208ENST00000512656 CLEC19AQ6UXS0 136 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 IZUMO2Q6UXV1 221 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 ADAMTSL5Q6ZMM2 481 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 PUSL1Q8N0Z8 303 aaKnown RBP5.4□□□□□ -1.54
USP46-208ENST00000512656 ZBTB34Q8NCN2 500 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 OR52B4Q8NGK2 314 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 CD300LFQ8TDQ1 290 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 FCGR1BQ92637 280 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 MARC2Q969Z3 335 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 FAM110AQ9BQ89 295 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 RETNQ9HD89 108 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 BET1LQ9NYM9 111 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 TAS2R8Q9NYW2 309 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 THYN1Q9P016 225 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 DAPK2Q9UIK4 370 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 ELF5Q9UKW6 265 aaPredicted RBP5.4□□□□□ -1.54
USP46-208ENST00000512656 RAB26Q9ULW5 256 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 SSR3Q9UNL2 185 aa5.4□□□□□ -1.54
USP46-208ENST00000512656 RRP15Q9Y3B9 282 aaKnown RBP5.4□□□□□ -1.54
USP46-208ENST00000512656 ALMS1Q8TCU4 4167 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 A0A0A6YYH2 397 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 TRAV25A0A0B4J276 109 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 IGKV1D-13A0A0B4J2D9 117 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 RBMY1BA6NDE4 496 aaKnown RBP5.39□□□□□ -1.55
USP46-208ENST00000512656 RBMY1EA6NEQ0 496 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms