RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 FAM60AQ9NP50 221 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 C20orf141Q9NUB4 165 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 CDC42EP2O14613 210 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 PEBP1P30086 187 aaKnown RBP4.2□□□□□ -1.74
PTPN13-209ENST00000511467 OR2T2Q6IF00 324 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 ALKAL2Q6UX46 152 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 ZNF497Q6ZNH5 498 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 LILRA3Q8N6C8 439 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-209ENST00000511467 CHCHD1Q96BP2 118 aaKnown RBP4.2□□□□□ -1.74
PTPN13-209ENST00000511467 NUDT11Q96G61 164 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 BEX2Q9BXY8 128 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 BEX1Q9HBH7 125 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 RPRMQ9NS64 109 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 BEX4Q9NWD9 120 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-209ENST00000511467 FLRT3Q9NZU0 649 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 IGHV3-13P01766 116 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 FOLR2P14207 255 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 SNAI3Q3KNW1 292 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 LHFPL5Q8TAF8 219 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 MSRB2Q9Y3D2 182 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 LHFPL6Q9Y693 200 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 RHODO00212 210 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 NUDT3O95989 172 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 AMY1AP04745 511 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 ZNF250P15622 560 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 MMDQ15546 238 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 FAM53AQ6NSI3 398 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-209ENST00000511467 PNKDQ8N490 385 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 IGFBPL1Q8WX77 278 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 TAF15Q92804 592 aaKnown RBP eCLIP4.2□□□□□ -1.74
PTPN13-209ENST00000511467 C8orf44Q96CB5 159 aa4.2□□□□□ -1.74
PTPN13-209ENST00000511467 LIN28AQ9H9Z2 209 aaKnown RBP4.2□□□□□ -1.74
PTPN13-209ENST00000511467 IGHV2OR16-5A0A0B4J2B6 119 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 C9JCJ5 164 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 COL9A1P20849 921 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 OTX1P32242 354 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-209ENST00000511467 PSG4Q00888 419 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 FAM27D1Q5T7N8 215 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 GTSCR1Q86UQ5 136 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM183AQ8IXX5 376 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 CYB561D1Q8N8Q1 229 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 SLC25A28Q96A46 364 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 LINC00477Q96M19 166 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM262E9PQX1 116 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 H0YL77 283 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 APCSP02743 223 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 TTRP02766 147 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 IGFBP3P17936 291 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-209ENST00000511467 SELENOPP49908 381 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 FOXL2NBQ6ZUU3 175 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM179BQ7Z7N9 219 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM123Q8N131 208 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 C10orf111Q8N326 155 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 LINC00311Q8N616 119 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 UQCR10Q9UDW1 63 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 PKD1L2Q7Z442 2459 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 PPIAL4CA0A0B4J2A2 164 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 MPTX1A8MV57 137 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 PPIAL4GP0DN37 164 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 C1QL4Q86Z23 238 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 OR8A1Q8NGG7 326 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 Q8TCH9 128 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 METTL1Q9UBP6 276 aaKnown RBP4.19□□□□□ -1.74
PTPN13-209ENST00000511467 PRR19A6NJB7 356 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 HSPB6O14558 160 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 UPK3AO75631 287 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 LYZL6O75951 148 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 VSIG8P0DPA2 414 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 LHX2P50458 406 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 PTTG1IPP53801 180 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 OR4X1Q8NH49 305 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 ZNF488Q96MN9 340 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 CHAC1Q9BUX1 264 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 EFSO43281 561 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 GLIPR1P48060 266 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 ELLP55199 621 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-209ENST00000511467 ATP5J2P56134 94 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 FOXE3Q13461 319 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 EFNB3Q15768 340 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 THSD4Q6ZMP0 1018 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 EDA2RQ9HAV5 297 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 SRRM5B3KS81 715 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 PF4V1P10720 104 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM11P17152 192 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 HBBP68871 147 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 DCAF12L2Q5VW00 463 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 HEPN1Q6WQI6 88 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 SLC25A48Q6ZT89 311 aaKnown RBP4.19□□□□□ -1.74
PTPN13-209ENST00000511467 PATE1Q8WXA2 126 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 RNF166Q96A37 237 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-209ENST00000511467 OR4C12Q96R67 309 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 AGMATQ9BSE5 352 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 OTORQ9NRC9 128 aa4.19□□□□□ -1.74
PTPN13-209ENST00000511467 A0A0J9YW62 118 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 B4DSR2 109 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 CD55P08174 381 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 MGAT2Q10469 447 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 KAAG1Q9UBP8 84 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 CHTOPQ9Y3Y2 248 aaKnown RBP4.18□□□□□ -1.74
PTPN13-209ENST00000511467 LINC01565O15544 149 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms