RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 HCFC1P51610 2035 aa7.19□□□□□ -1.26
HTT-208ENST00000510626 ANOS1P23352 680 aa7.19□□□□□ -1.26
HTT-208ENST00000510626 WNT5BQ9H1J7 359 aa7.19□□□□□ -1.26
HTT-208ENST00000510626 FNDC10F2Z333 226 aa7.19□□□□□ -1.26
HTT-208ENST00000510626 CACNG7P62955 275 aa7.19□□□□□ -1.26
HTT-208ENST00000510626 SPRED2Q7Z698 418 aa7.19□□□□□ -1.26
HTT-208ENST00000510626 EBLN2Q6P2I7 272 aa7.19□□□□□ -1.26
HTT-208ENST00000510626 IGHV1OR21-1A0A087WYE8 117 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 LOC389332A0A1B0GUA5 103 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 GAGE12BA1L429 117 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 TM4SF20Q53R12 229 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 SLC25A47Q6Q0C1 308 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 HES7Q9BYE0 225 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 H0Y8X5 98 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 CBLN1P23435 193 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 PRSS8Q16651 343 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 CBLN3Q6UW01 205 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 CITED2Q99967 270 aaPredicted RBP7.18□□□□□ -1.26
HTT-208ENST00000510626 ZNF703Q9H7S9 590 aaPredicted RBP7.18□□□□□ -1.26
HTT-208ENST00000510626 HIST1H2BLQ99880 126 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 RUNX1Q01196 453 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 DLX4Q92988 240 aaPredicted RBP7.18□□□□□ -1.26
HTT-208ENST00000510626 KCNK17Q96T54 332 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.18□□□□□ -1.26
HTT-208ENST00000510626 F2Z2F3 143 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 MPV17P39210 176 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 GAGE2BQ13066 116 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 GAGE2EQ4V326 116 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 BATF2Q8N1L9 274 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 GAGE2DQ9UEU5 116 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 ARHGAP32A7KAX9 2087 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 A0A0G2JMM0 328 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 A0A1W2PPB8 328 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 KIR3DP1A8MWS1 328 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 IGHV2-70P01814 119 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 ZFP36L2P47974 494 aaKnown RBP7.18□□□□□ -1.26
HTT-208ENST00000510626 FAM106CPP0CH98 169 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 ZSWIM8A7E2V4 1837 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 MIC13Q5XKP0 118 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 PRSS27Q9BQR3 290 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 MYO9AB2RTY4 2548 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 GDF9O60383 454 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 CXorf66Q5JRM2 361 aaPredicted RBP7.18□□□□□ -1.26
HTT-208ENST00000510626 OR1K1Q8NGR3 316 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 SDF2L1Q9HCN8 221 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 SPANXB1Q9NS25 103 aaPredicted RBP7.18□□□□□ -1.26
HTT-208ENST00000510626 PLXNA3P51805 1871 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 ZNF488Q96MN9 340 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 NRN1Q9NPD7 142 aa7.18□□□□□ -1.26
HTT-208ENST00000510626 hCG_38984A0A1B0GV85 526 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 PEX7O00628 323 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 TMPRSS2O15393 492 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 KLHDC2Q9Y2U9 406 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 IGLV1-36A0A0B4J1U3 117 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 HIST3H2BBQ8N257 126 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 OR2K2Q8NGT1 345 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 CKS1BP61024 79 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 SPINK9Q5DT21 86 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 BIVMQ86UB2 503 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 SHISA5Q8N114 240 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 LPAR2Q9HBW0 351 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 H3BQ85 93 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 KLF4O43474 513 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 PLXNA2O75051 1894 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 DLX6P56179 175 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 ATOH7Q8N100 152 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 PPIHO43447 177 aaKnown RBP7.17□□□□□ -1.26
HTT-208ENST00000510626 SOX8P57073 446 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 ACTL10Q5JWF8 245 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 ICAM4Q14773 271 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 EIF4EBP2Q13542 120 aaPredicted RBP7.17□□□□□ -1.26
HTT-208ENST00000510626 TICRRQ7Z2Z1 1910 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 SIVA1O15304 175 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 CD3EP07766 207 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 OR52E5Q8NH55 327 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 OR5P3Q8WZ94 311 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 TMUB1Q9BVT8 246 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 RPRMQ9NS64 109 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 A8MWV9 139 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 LHX2P50458 406 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 FUT5Q11128 374 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 GAGE13Q4V321 117 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 CXorf67Q86X51 503 aaPredicted RBP7.17□□□□□ -1.26
HTT-208ENST00000510626 PRR14LQ5THK1 2151 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 LOC102724200A0A096LPH7 203 aaPredicted RBP7.17□□□□□ -1.26
HTT-208ENST00000510626 ZNF841Q6ZN19 808 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 DRAM1Q8N682 238 aa7.17□□□□□ -1.26
HTT-208ENST00000510626 A0A1W2PP11 408 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 K7EMI3 77 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 C18orf12Q96KH6 178 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 PRSS2P07478 247 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 CCL20P78556 96 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 COL18A1P39060 1754 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 UBE2L6O14933 153 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 RPL27AP46776 148 aaKnown RBP7.16□□□□□ -1.26
HTT-208ENST00000510626 TMEM186Q96B77 213 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 ANKHD1Q8IWZ3 2542 aaKnown RBP7.16□□□□□ -1.26
HTT-208ENST00000510626 LOC285556D6RIA3 1793 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 OR2H2O95918 312 aa7.16□□□□□ -1.26
HTT-208ENST00000510626 MGPP08493 103 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms