RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 DMBX1Q8NFW5 382 aa10.43□□□□□ -0.74
SNF8-206ENST00000509989 OR13C8Q8NGS7 320 aa10.43□□□□□ -0.74
SNF8-206ENST00000509989 TP53RKQ96S44 253 aa10.43□□□□□ -0.74
SNF8-206ENST00000509989 SLA2Q9H6Q3 261 aa10.43□□□□□ -0.74
SNF8-206ENST00000509989 SLC2A9Q9NRM0 540 aa10.43□□□□□ -0.74
SNF8-206ENST00000509989 TEX50A0A1B0GTY4 177 aa10.42□□□□□ -0.74
SNF8-206ENST00000509989 FABP12A6NFH5 140 aa10.42□□□□□ -0.74
SNF8-206ENST00000509989 LINC01619G3V211 115 aa10.42□□□□□ -0.74
SNF8-206ENST00000509989 MPPED1O15442 326 aa10.42□□□□□ -0.74
SNF8-206ENST00000509989 PGAM2P15259 253 aa10.42□□□□□ -0.74
SNF8-206ENST00000509989 TAS2R19P59542 299 aa10.42□□□□□ -0.74
SNF8-206ENST00000509989 RHOGP84095 191 aa10.42□□□□□ -0.74
SNF8-206ENST00000509989 EGFEM1PQ0D2K5 195 aa10.42□□□□□ -0.74
SNF8-206ENST00000509989 SP6Q3SY56 376 aa10.42□□□□□ -0.74
SNF8-206ENST00000509989 FANCD2OSQ96PS1 177 aa10.42□□□□□ -0.74
SNF8-206ENST00000509989 SORL1Q92673 2214 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 TRBV9A0A0B4J1U6 114 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 IGLC7A0M8Q6 106 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 ANKRD20A5PA0PJZ0 165 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 DPPA5A6NC42 116 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 MARCH11A6NNE9 402 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 SEC14L6B5MCN3 397 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 H3BUA1 57 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 GSTZ1O43708 216 aaPredicted RBP10.41□□□□□ -0.74
SNF8-206ENST00000509989 ACTL6BO94805 426 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 NDUFB8O95169 186 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 HSPB1P04792 205 aaKnown RBP10.41□□□□□ -0.74
SNF8-206ENST00000509989 IFNA6P05013 189 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 PIGPP57054 158 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 CMTM1Q8IZ96 169 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 SLC38A6Q8IZM9 456 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 ARRDC1Q8N5I2 433 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 TERB2Q8NHR7 220 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 VSTM2AQ8TAG5 236 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 DPF1Q92782 380 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 SEC22AQ96IW7 307 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 SPIN2AQ99865 258 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 SPIN2BQ9BPZ2 258 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 RTBDNQ9BSG5 229 aaPredicted RBP10.41□□□□□ -0.74
SNF8-206ENST00000509989 COMMD9Q9P000 198 aa10.41□□□□□ -0.74
SNF8-206ENST00000509989 A0A0G2JRQ6 117 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 C13orf42A0A1B0GVH6 325 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 OVOL1O14753 267 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 BRI3O95415 125 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 IGKV1-5P01602 117 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 OR8U8P0C7N1 319 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 CTRB1P17538 263 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 EDN2P20800 178 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 PSMB6P28072 239 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 MAS1LP35410 378 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 MFAP2P55001 183 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 WT1-ASQ06250 92 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 CTRB2Q6GPI1 263 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 ZNF343Q6P1L6 599 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 CCDC190Q86UF4 302 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 OR51S1Q8NGJ8 323 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 OR4A5Q8NH83 315 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 TRIM63Q969Q1 353 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 TMEM68Q96MH6 324 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 PRR25Q96S07 402 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 PRR13Q9NZ81 148 aa10.4□□□□□ -0.74
SNF8-206ENST00000509989 NPIPB5A8MRT5 1133 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 PPP5D1E7EU14 171 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 BMPR1BO00238 502 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 HLA-AP01891 365 aaKnown RBP10.39□□□□□ -0.75
SNF8-206ENST00000509989 CRYGCP07315 174 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 AKAIN1P0CW23 69 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 TBPP20226 339 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 RND3P61587 244 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 MRPS10P82664 201 aaKnown RBP10.39□□□□□ -0.75
SNF8-206ENST00000509989 EXOSC2Q13868 293 aaKnown RBP10.39□□□□□ -0.75
SNF8-206ENST00000509989 LPCAT3Q6P1A2 487 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 LHFPL5Q8TAF8 219 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 MRAPQ8TCY5 172 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 CD300LFQ8TDQ1 290 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 C15orf40Q8WUR7 153 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 BORCS5Q969J3 196 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 THAP7Q9BT49 309 aaPredicted RBP10.39□□□□□ -0.75
SNF8-206ENST00000509989 C5orf66Q9H5L9 145 aa10.39□□□□□ -0.75
SNF8-206ENST00000509989 IGLV11-55A0A075B6I3 123 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 MFSD2BA6NFX1 497 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 CREBL2O60519 120 aaPredicted RBP10.38□□□□□ -0.75
SNF8-206ENST00000509989 DUS4LO95620 317 aaKnown RBP10.38□□□□□ -0.75
SNF8-206ENST00000509989 P0C879 139 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 CD40LGP29965 261 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 SSBP1Q04837 148 aaKnown RBP10.38□□□□□ -0.75
SNF8-206ENST00000509989 KLF9Q13886 244 aaPredicted RBP10.38□□□□□ -0.75
SNF8-206ENST00000509989 C15orf32Q32M92 178 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 PYDC2Q56P42 97 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 SPINK9Q5DT21 86 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 IL34Q6ZMJ4 242 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 OR6Q1Q8NGQ2 317 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 TMEM230Q96A57 120 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 CCDC140Q96MF4 163 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 HINT2Q9BX68 163 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 PEF1Q9UBV8 284 aaKnown RBP10.38□□□□□ -0.75
SNF8-206ENST00000509989 FBXL7Q9UJT9 491 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 GPR132Q9UNW8 380 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 ZNF257Q9Y2Q1 563 aa10.38□□□□□ -0.75
SNF8-206ENST00000509989 SELENOKQ9Y6D0 94 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms