RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CA2P00918 260 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 ARF6P62330 175 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 C10orf91Q5T1B1 145 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 ZNF709Q8N972 641 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 CLRN3Q8NCR9 226 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 ITLN2Q8WWU7 325 aaPredicted RBP12.09□□□□□ -0.47
PHF3-209ENST00000509330 PATZ1Q9HBE1 687 aaKnown RBP12.09□□□□□ -0.47
PHF3-209ENST00000509330 RPS10P5Q9NQ39 176 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 MAP1LC3B2A6NCE7 125 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 SOX15O60248 233 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 SFTPCP11686 197 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 HSPE1P61604 102 aaKnown RBP12.09□□□□□ -0.47
PHF3-209ENST00000509330 TMEM41BQ5BJD5 291 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 CYB561D1Q8N8Q1 229 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 FLYWCH2Q96CP2 140 aaKnown RBP12.09□□□□□ -0.47
PHF3-209ENST00000509330 MAP1LC3BQ9GZQ8 125 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 TMEM133Q9H2Q1 129 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 TMEM14BQ9NUH8 114 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 ZFHX3Q15911 3703 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 C22orf46C9J442 243 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 NDUFA2O43678 99 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 IGHV3-48P01763 117 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 MLANAQ16655 118 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 AWAT1Q58HT5 328 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 SLC24A4Q8NFF2 622 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 OR10G4Q8NGN3 311 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 OR10G9Q8NGN4 311 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 OR10G7Q8NGN6 311 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 OR9G1Q8NH87 305 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 GATAD1Q8WUU5 269 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 NABP2Q9BQ15 211 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 SLC35B3Q9H1N7 401 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 SLC39A9Q9NUM3 307 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 EPG5Q9HCE0 2579 aa12.09□□□□□ -0.47
PHF3-209ENST00000509330 ABCA1O95477 2261 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 SLC25A17O43808 307 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 ARG1P05089 322 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 NPY1RP25929 384 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 ICAM4Q14773 271 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 LFNGQ8NES3 379 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 CLDND2Q8NHS1 167 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 LHX4Q969G2 390 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 PSMG3Q9BT73 122 aaPredicted RBP12.08□□□□□ -0.48
PHF3-209ENST00000509330 PLEKHA3Q9HB20 300 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 KIAA1456Q9P272 454 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 IGHV2-26A0A0B4J1V2 119 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 UPK2O00526 184 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 CNTFRP26992 372 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 PPOXP50336 477 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 SOHLH1Q5JUK2 328 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 WDR25Q64LD2 544 aaPredicted RBP12.08□□□□□ -0.48
PHF3-209ENST00000509330 COMMD1Q8N668 190 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 OR8B3Q8NGG8 313 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 ISOC2Q96AB3 205 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 OR8B2Q96RD0 313 aa12.08□□□□□ -0.48
PHF3-209ENST00000509330 TEX50A0A1B0GTY4 177 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 SCAF4O95104 1147 aaKnown RBP12.07□□□□□ -0.48
PHF3-209ENST00000509330 ZNF429Q86V71 674 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 RAB39BQ96DA2 213 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 FOXA2Q9Y261 457 aaPredicted RBP12.07□□□□□ -0.48
PHF3-209ENST00000509330 KPTNQ9Y664 436 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 CELSR1Q9NYQ6 3014 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 KBTBD11O94819 623 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 PRB1P04280 392 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 REG1AP05451 166 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 GNB2P62879 340 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 SERF2P84101 59 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 KLRD1Q13241 179 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 MIC13Q5XKP0 118 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 TREML4Q6UXN2 200 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 PNKDQ8N490 385 aa12.07□□□□□ -0.48
PHF3-209ENST00000509330 CD24P25063 80 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 RAB11AP62491 216 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 ATP6V1FQ16864 119 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 OR5AN1Q8NGI8 311 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 FAM216AQ8WUB2 273 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 ZNF462Q96JM2 2506 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 FAM90A9PA6NNJ1 464 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 ARSJQ5FYB0 599 aaPredicted RBP12.06□□□□□ -0.48
PHF3-209ENST00000509330 C11orf71Q6IPW1 123 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 C19orf35Q6ZS72 473 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 OR10A7Q8NGE5 316 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 OR52E5Q8NH55 327 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 COMMD5Q9GZQ3 224 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 CENPEQ02224 2701 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 FAM208BQ5VWN6 2430 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 HBE1P02100 147 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 RPP30P78346 268 aaKnown RBP12.06□□□□□ -0.48
PHF3-209ENST00000509330 TMEM30BQ3MIR4 351 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 PRNDQ9UKY0 176 aa12.06□□□□□ -0.48
PHF3-209ENST00000509330 AARDQ4LEZ3 155 aa12.05□□□□□ -0.48
PHF3-209ENST00000509330 C4orf17Q53FE4 359 aa12.05□□□□□ -0.48
PHF3-209ENST00000509330 RAB1CQ92928 201 aa12.05□□□□□ -0.48
PHF3-209ENST00000509330 ST6GALNAC6Q969X2 333 aa12.05□□□□□ -0.48
PHF3-209ENST00000509330 TMEM186Q96B77 213 aa12.05□□□□□ -0.48
PHF3-209ENST00000509330 NEIL1Q96FI4 390 aaPredicted RBP12.05□□□□□ -0.48
PHF3-209ENST00000509330 TIMD4Q96H15 378 aa12.05□□□□□ -0.48
PHF3-209ENST00000509330 MGST2Q99735 147 aa12.05□□□□□ -0.48
PHF3-209ENST00000509330 SRP19P09132 144 aaKnown RBP12.05□□□□□ -0.48
PHF3-209ENST00000509330 GATA2P23769 480 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms