RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 SP4Q02446 784 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 SMAGPQ0VAQ4 97 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 ELAVL3Q14576 367 aaKnown RBP4.06□□□□□ -1.76
LINC01088-205ENST00000509088 ITPRIPL2Q3MIP1 535 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 CCSMST1Q4G0I0 132 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 ZNF658BQ4V348 819 aaPredicted RBP4.06□□□□□ -1.76
LINC01088-205ENST00000509088 TMEM42Q69YG0 159 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 YRDCQ86U90 279 aaKnown RBP4.06□□□□□ -1.76
LINC01088-205ENST00000509088 CDC20BQ86Y33 519 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 MAPKAPK5-AS1Q8N8E1 139 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 Q8N976 141 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 THAP8Q8NA92 274 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 ZFP62Q8NB50 900 aaPredicted RBP4.06□□□□□ -1.76
LINC01088-205ENST00000509088 OR2Z1Q8NG97 314 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 OR10G9Q8NGN4 311 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 OR4C3Q8NH37 302 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 C18orf32Q8TCD1 76 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 CACNG8Q8WXS5 425 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 C5orf30Q96GV9 206 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 PRSS27Q9BQR3 290 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 TIMM29Q9BSF4 260 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 SMIM3Q9BZL3 60 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 PARP12Q9H0J9 701 aaKnown RBP4.06□□□□□ -1.76
LINC01088-205ENST00000509088 CALHM2Q9HA72 323 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 HSPB8Q9UJY1 196 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 ZNF443Q9Y2A4 671 aaPredicted RBP4.06□□□□□ -1.76
LINC01088-205ENST00000509088 SLC17A4Q9Y2C5 497 aa4.06□□□□□ -1.76
LINC01088-205ENST00000509088 XIRP1Q702N8 1843 aaKnown RBP4.06□□□□□ -1.76
LINC01088-205ENST00000509088 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.05□□□□□ -1.76
LINC01088-205ENST00000509088 TRAV25A0A0B4J276 109 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 CLDN5O00501 218 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 MLNRO43193 412 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 ZNF737O75373 536 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 SAP30O75446 220 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 ETHE1O95571 254 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 TMEM50AO95807 157 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 NUDT14O95848 222 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 RENP00797 406 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 HLA-DQA1P01909 254 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 H2BFMP0C1H6 154 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 PIRTP0C851 137 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 IGHV4-38-2P0DP08 117 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 ALOX5APP20292 161 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 RPS12P25398 132 aaKnown RBP4.05□□□□□ -1.76
LINC01088-205ENST00000509088 ZNF93P35789 620 aaPredicted RBP4.05□□□□□ -1.76
LINC01088-205ENST00000509088 HBG1P69891 147 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 HBG2P69892 147 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 NUMA1Q14980 2115 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 OR1Q1Q15612 314 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 GCSAMLQ5JQS6 135 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 DCAF12Q5T6F0 453 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 ZNF550Q7Z398 422 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 BOD1L2Q8IYS8 172 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 LRRC75AQ8NAA5 344 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 OR8B3Q8NGG8 313 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 OR5AR1Q8NGP9 310 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 OR4A16Q8NH70 328 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 ATP6V0E2Q8NHE4 81 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 LSM10Q969L4 123 aaKnown RBP4.05□□□□□ -1.76
LINC01088-205ENST00000509088 ZNF524Q96C55 264 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 PCED1BQ96HM7 432 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 C18orf12Q96KH6 178 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 Q96M85 177 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 TSSK2Q96PF2 358 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 OR8B2Q96RD0 313 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 RAB40CQ96S21 281 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 HINT2Q9BX68 163 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 WDR61Q9GZS3 305 aaKnown RBP4.05□□□□□ -1.76
LINC01088-205ENST00000509088 TMEM191AQ9H0A3 160 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 GTSF1LQ9H1H1 148 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 SH3BGRL3Q9H299 93 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 NAA60Q9H7X0 242 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 AKIRIN1Q9H9L7 192 aaPredicted RBP4.05□□□□□ -1.76
LINC01088-205ENST00000509088 ZNF257Q9Y2Q1 563 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 DENND4CQ5VZ89 1909 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 PLXNA2O75051 1894 aa4.05□□□□□ -1.76
LINC01088-205ENST00000509088 NUP210Q8TEM1 1887 aaPredicted RBP4.05□□□□□ -1.76
LINC01088-205ENST00000509088 IGLV9-49A0A0B4J1Y8 123 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 MDFIC2A0A1B0GVS7 189 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 IGLON5A6NGN9 336 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 OR2T8A6NH00 312 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 TMEM14DPA8MWL7 114 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 TMEM262E9PQX1 116 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 H7C1C5 153 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 LYPD3O95274 346 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 IGLV3-27P01718 113 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 IGHG3P01860 377 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 HMGN2P05204 90 aaKnown RBP4.04□□□□□ -1.76
LINC01088-205ENST00000509088 C3orf79P0CE67 100 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 SP9P0CG40 484 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 LIFP15018 202 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 HIST1H1CP16403 213 aaKnown RBP4.04□□□□□ -1.76
LINC01088-205ENST00000509088 CD27P26842 260 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 GPR183P32249 361 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 NKX2-1P43699 371 aaPredicted RBP4.04□□□□□ -1.76
LINC01088-205ENST00000509088 OR1D4P47884 311 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 ASCL1P50553 236 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 ZNF133P52736 654 aaPredicted RBP4.04□□□□□ -1.76
LINC01088-205ENST00000509088 ZNF136P52737 540 aa4.04□□□□□ -1.76
LINC01088-205ENST00000509088 MLF1P58340 268 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms