RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TAAR3PQ9P1P4 343 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 SLC23A2Q9UGH3 650 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 TNFSF18Q9UNG2 199 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 IGHV4OR15-8A0A075B7B6 117 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 C12orf77C9JDV5 145 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF587BE7ETH6 402 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 G6PCP35575 357 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 APOFQ13790 326 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 HERPUD1Q15011 391 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 TIGITQ495A1 244 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 ARRDC1Q8N5I2 433 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 DNAJC30Q96LL9 226 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 EHFQ9NZC4 300 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 MYOFQ9NZM1 2061 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 ADAMTS9Q9P2N4 1935 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 TRAV36DV7A0A075B6V5 113 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 IGSF23A1L1A6 192 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 C1QTNF9P0C862 333 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 IL3RAP26951 378 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 AQP4P55087 323 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 CTBP2P56545 445 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 NANOS2P60321 138 aaKnown RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 EIF3IQ13347 325 aaKnown RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 EBPQ15125 230 aaKnown RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 C9orf153Q5TBE3 101 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 MORN3Q6PF18 240 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF101Q8IZC7 436 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 FER1L6-AS1Q8NA97 138 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 GPR146Q96CH1 333 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 MS4A6EQ96DS6 147 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 OXGR1Q96P68 337 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 KLK15Q9H2R5 256 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 BCL2L10Q9HD36 194 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 FLVCR1Q9Y5Y0 555 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 IGHV2OR16-5A0A0B4J2B6 119 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 IGHV4-28A0A0C4DH34 117 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 A0A0G2JMM0 328 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 A0A1W2PPB8 328 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 KIR3DP1A8MWS1 328 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 FGF6P10767 208 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 FABP4P15090 132 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 HINT1P49773 126 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 EMX1Q04741 257 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 CCSMST1Q4G0I0 132 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 WDR38Q5JTN6 314 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF584Q8IVC4 421 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 TMEM256Q8N2U0 113 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 LINC01555Q8NAE3 123 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 OR52R1Q8NGF1 315 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 OR2T4Q8NH00 348 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 LCN9Q8WX39 176 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 IP6K3Q96PC2 410 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 GTSF1LQ9H1H1 148 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 ATG5Q9H1Y0 275 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 C11orf68Q9H3H3 251 aaKnown RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 LINC00527Q9UJ94 153 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 PIKFYVEQ9Y2I7 2098 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 IGHV1OR21-1A0A087WYE8 117 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 IGHV1-69-2A0A0G2JMI3 117 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 NDUFA2O43678 99 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 MT-ND4LP03901 98 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 RNASE1P07998 156 aaKnown RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 PGA5P0DJD9 388 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 C8orf88P0DMB2 117 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 IGHV4-30-4P0DP06 118 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 GNB3P16520 340 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 DDOSTP39656 456 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 LGALS7P47929 136 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 FZD2Q14332 565 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 AAED1Q7RTV5 226 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 SLC25A42Q86VD7 318 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 LRRC18Q8N456 261 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 IQCF1Q8N6M8 205 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 TAS2R5Q9NYW4 299 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 VPREB3Q9UKI3 123 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 PCDH15Q96QU1 1955 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 LMO7DNF2Z398 122 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 PPBPP02775 128 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 UMODP07911 640 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 HSPE1P61604 102 aaKnown RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 RPS25P62851 125 aaKnown RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 IGLV3-21P80748 117 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 C1QL3Q5VWW1 255 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 SLC48A1Q6P1K1 146 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 OR4K13Q8NH42 304 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 OR7D2Q96RA2 312 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 WDR61Q9GZS3 305 aaKnown RBP3.22□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF286AQ9HBT8 521 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 SCP2D1Q9UJQ7 156 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF337Q9Y3M9 751 aa3.22□□□□□ -1.89
NEDD4-209ENST00000508871 ARHGEF17Q96PE2 2063 aaPredicted RBP3.21□□□□□ -1.89
NEDD4-209ENST00000508871 IGKV1-8A0A0C4DH67 115 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 ODAMA1E959 279 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 C9JAW5 83 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 C1QBP02746 253 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 NBEAP1P0C6P0 100 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 COL8A1P27658 744 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 CA7P43166 264 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 ERVS71-1P61550 626 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms