RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 VAMP8Q9BV40 100 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 SAMD10Q9BYL1 202 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 CXXC4Q9H2H0 198 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 TMEM140Q9NV12 185 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 GNG12Q9UBI6 72 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 FBXL7Q9UJT9 491 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 KNTC1P50748 2209 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 ZDBF2Q9HCK1 2354 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 CGAP01215 116 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 ACP1P24666 158 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 ZNF134P52741 427 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 TMPRSS3P57727 454 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 C1orf229Q6ZS94 237 aaPredicted RBP11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 ST6GALNAC3Q8NDV1 305 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 OR4P4Q8NGL7 312 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 CHODLQ9H9P2 273 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 TCF19Q9Y242 345 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 V9GYV3 84 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 M0QZK8 103 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 ACTL6BO94805 426 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 TNFSF15O95150 251 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 MYOD1P15172 320 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 BRS3P32247 399 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 FABP6P51161 128 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 RANP62826 216 aaKnown RBP11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 HTD2P86397 168 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 TMEM183BQ1AE95 376 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 RPEL1Q2QD12 228 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 MORN2Q502X0 79 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 MDS2Q8NDY4 140 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 GNB4Q9HAV0 340 aa11.08□□□□□ -0.64
SNCAIP-209ENST00000508017 TRGV5A0A0B4J1U4 118 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 ZNF891A8MT65 544 aaPredicted RBP11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 AHRRA9YTQ3 701 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 TIMM8AO60220 97 aaPredicted RBP11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 ADH4P08319 380 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 ERVK-16P61578 105 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 SLC35B1P78383 322 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 KIAA1644Q3SXP7 199 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 MIR17HGQ75NE6 70 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 C11orf52Q96A22 123 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 FAM122AQ96E09 287 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 NPVFQ9HCQ7 196 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 KLF13Q9Y2Y9 288 aaPredicted RBP11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 GOLT1BQ9Y3E0 138 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 TRAV9-1A0A075B6T8 112 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 IGFBP2P18065 325 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 KRTDAPP60985 99 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 RHOBP62745 196 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 SMIM21Q3B7S5 101 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 FAM90A1Q86YD7 464 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 DOLPP1Q86YN1 238 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 Q8N976 141 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 OR52E5Q8NH55 327 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 LRRC29Q8WV35 223 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 LEAP2Q969E1 77 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 LPAR2Q9HBW0 351 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 ASPMQ8IZT6 3477 aa11.07□□□□□ -0.64
SNCAIP-209ENST00000508017 HEATR1Q9H583 2144 aaKnown RBP11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 TRGV10A0A0A0MS01 117 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 FAM90A9PA6NNJ1 464 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 C9JCJ5 164 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 KLRC4-KLRK1H3BQV0 150 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 PRDX2P32119 198 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 Q0VG73 95 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 FXYD3Q14802 87 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 CENPWQ5EE01 88 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 ZPBPQ9BS86 351 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 RNASE7Q9H1E1 156 aaKnown RBP11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 A8MXE2 369 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 TFPI2P48307 235 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 ATP1A1-AS1Q5TC04 95 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 TEPPQ6URK8 271 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 GMPPAQ96IJ6 420 aaPredicted RBP11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 RCHY1Q96PM5 261 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 UHRF2Q96PU4 802 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 OPN3Q9H1Y3 402 aaPredicted RBP11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 IFI27L2Q9H2X8 130 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 DUSP13Q9UII6 198 aa11.06□□□□□ -0.64
SNCAIP-209ENST00000508017 IGHV3OR15-7A0A075B7D8 119 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 CRYBB3P26998 211 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 TCL1AP56279 114 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 PQLC2Q6ZP29 291 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 S1PR3Q99500 378 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 ZFHX4Q86UP3 3567 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 TNCP24821 2201 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 IGKV1D-17A0A075B6S4 117 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 CA2P00918 260 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 GPX1P07203 203 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 NPY1RP25929 384 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 PSG5Q15238 335 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 ASPHD1Q5U4P2 390 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 INO80CQ6PI98 192 aaPredicted RBP11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 MOB3BQ86TA1 216 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 SIGLECL1Q8N7X8 197 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 SLC24A4Q8NFF2 622 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 SFXN3Q9BWM7 321 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 NAT8BQ9UHF3 227 aa11.05□□□□□ -0.64
SNCAIP-209ENST00000508017 TBL2Q9Y4P3 447 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms