RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SDSLQ96GA7 329 aa11.91□□□□□ -0.5
DDX41-208ENST00000507955 WFIKKN1Q96NZ8 548 aa11.91□□□□□ -0.5
DDX41-208ENST00000507955 HINT2Q9BX68 163 aa11.91□□□□□ -0.5
DDX41-208ENST00000507955 TRAV38-1A0A0B4J264 116 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 IGKV1-16P04430 117 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 PFN1P07737 140 aaKnown RBP11.9□□□□□ -0.5
DDX41-208ENST00000507955 GAMTQ14353 236 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 ZNF788Q6ZQV5 615 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 CENPVQ7Z7K6 275 aaPredicted RBP11.9□□□□□ -0.5
DDX41-208ENST00000507955 OR4X1Q8NH49 305 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 DDB2Q92466 427 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 RHOVQ96L33 236 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 ELOVL1Q9BW60 279 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 LAMP3Q9UQV4 416 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 COL6A6A6NMZ7 2263 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 ELOA3CA0A087WX78 387 aaPredicted RBP11.9□□□□□ -0.5
DDX41-208ENST00000507955 HIST1H1BP16401 226 aaKnown RBP11.9□□□□□ -0.5
DDX41-208ENST00000507955 RPL23P62829 140 aaKnown RBP11.9□□□□□ -0.5
DDX41-208ENST00000507955 MRPS11P82912 194 aaKnown RBP11.9□□□□□ -0.5
DDX41-208ENST00000507955 CLEC12BQ2HXU8 276 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 CYP2G1PQ6ZSU1 146 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 Q8N7P7 452 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 HIST1H2BLQ99880 126 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 NAT8Q9UHE5 227 aa11.9□□□□□ -0.5
DDX41-208ENST00000507955 SOX15O60248 233 aa11.9□□□□□ -0.51
DDX41-208ENST00000507955 PRB3Q04118 309 aaPredicted RBP11.9□□□□□ -0.51
DDX41-208ENST00000507955 UNQ6494/PRO21346Q6UXR6 183 aa11.9□□□□□ -0.51
DDX41-208ENST00000507955 RAB24Q969Q5 203 aa11.9□□□□□ -0.51
DDX41-208ENST00000507955 PATZ1Q9HBE1 687 aaKnown RBP11.9□□□□□ -0.51
DDX41-208ENST00000507955 KBTBD11O94819 623 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 IFNA1P01562 189 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 IRF2P14316 349 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 TNFSF4P23510 183 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 GPX4P36969 197 aaPredicted RBP11.89□□□□□ -0.51
DDX41-208ENST00000507955 REG1BP48304 166 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 C3orf36Q3SXR2 165 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 OR4A47Q6IF82 309 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 LYPD2Q6UXB3 125 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 TCTEX1D1Q8N7M0 179 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 ZCCHC14Q8WYQ9 949 aaKnown RBP11.89□□□□□ -0.51
DDX41-208ENST00000507955 FAM122AQ96E09 287 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 CIB3Q96Q77 187 aaPredicted RBP11.89□□□□□ -0.51
DDX41-208ENST00000507955 PARLQ9H300 379 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 TIMM9Q9Y5J7 89 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 C17orf100A8MU93 164 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 GFRA3O60609 400 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 CD1BP29016 333 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 ERVK-16P61578 105 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 PMS2P11Q13670 270 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 TMEM241Q24JQ0 296 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 CTDSP1Q9GZU7 261 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 GAB2Q9UQC2 676 aa11.89□□□□□ -0.51
DDX41-208ENST00000507955 PLXNB1O43157 2135 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 SRRM4A7MD48 611 aaKnown RBP11.88□□□□□ -0.51
DDX41-208ENST00000507955 DLX1P56177 255 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 BSXQ3C1V8 233 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 ZNF439Q8NDP4 499 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 NUP37Q8NFH4 326 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 OR10A7Q8NGE5 316 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 PACRGQ96M98 296 aaPredicted RBP11.88□□□□□ -0.51
DDX41-208ENST00000507955 TCF19Q9Y242 345 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 VDAC2P45880 294 aaPredicted RBP11.88□□□□□ -0.51
DDX41-208ENST00000507955 GNB2P62879 340 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 DIAPH2-AS1Q14236 149 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 ZNF709Q8N972 641 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 OR51G1Q8NGK1 321 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 PYGO2Q9BRQ0 406 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 SAP30LQ9HAJ7 183 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 IDI2-AS1Q9NZ38 188 aa11.88□□□□□ -0.51
DDX41-208ENST00000507955 HRNRQ86YZ3 2850 aaPredicted RBP11.88□□□□□ -0.51
DDX41-208ENST00000507955 CTXND1A0A1B0GTU2 59 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 NPPCP23582 126 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 SPCS3P61009 180 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 PRSS8Q16651 343 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 ATP6V1FQ16864 119 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 OR4F5Q8NH21 305 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 SSMEM1Q8WWF3 244 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 OR4F4Q96R69 305 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 MS4A5Q9H3V2 200 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 SLC25A10Q9UBX3 287 aaPredicted RBP11.87□□□□□ -0.51
DDX41-208ENST00000507955 GATCO43716 136 aaKnown RBP11.87□□□□□ -0.51
DDX41-208ENST00000507955 CT45A6P0DMU7 189 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 CT45A5P0DMU8 189 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 CT45A7P0DMV0 189 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 UBE2G2P60604 165 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 TREML4Q6UXN2 200 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 MOB3BQ86TA1 216 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 H1FXQ92522 213 aaKnown RBP11.87□□□□□ -0.51
DDX41-208ENST00000507955 TMEM204Q9BSN7 226 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 SRD5A3Q9H8P0 318 aa11.87□□□□□ -0.51
DDX41-208ENST00000507955 PAGE4O60829 102 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 PLAUP00749 431 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 GRNP28799 593 aaKnown RBP11.86□□□□□ -0.51
DDX41-208ENST00000507955 PSMB3P49720 205 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 RPL31P62899 125 aaKnown RBP11.86□□□□□ -0.51
DDX41-208ENST00000507955 VWC2Q2TAL6 325 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 MIC13Q5XKP0 118 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 OR4S2Q8NH73 311 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 C1orf159Q96HA4 380 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 PRO1933Q9H354 126 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms