RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 DISP1Q96F81 1524 aa1.43□□□□□ -2.18
HMGB1P28-201ENST00000507778 DCCP43146 1447 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 A0A0D9SEW6 157 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 KCNK1O00180 336 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 LEPROTO15243 131 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 IFNA5P01569 189 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 PPBPP02775 128 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 DEFA4P12838 97 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 NKX2-5P52952 324 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 GLT8D1Q68CQ7 371 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 PTRHD1Q6GMV3 140 aaKnown RBP1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 RPP25LQ8N5L8 163 aaKnown RBP1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 OR51D1Q8NGF3 324 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 ACOT12Q8WYK0 555 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 PARVGQ9HBI0 331 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 GUCA1BQ9UMX6 200 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 FUT9Q9Y231 359 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 TIMM22Q9Y584 194 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 SLX4Q8IY92 1834 aa1.42□□□□□ -2.18
HMGB1P28-201ENST00000507778 COL11A1P12107 1806 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 MEIKINA0A087WXM9 373 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 INMT-MINDY4F8WBC2 141 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 NOS1APO75052 506 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 ZNF737O75373 536 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 AHSA1O95433 338 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 TNNC2P02585 160 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 ZNF705DP0CH99 300 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 HLA-DMBP28068 263 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 CCDC122Q5T0U0 273 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 SLC36A1Q7Z2H8 476 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 TMEM86AQ8N2M4 240 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 OR1M1Q8NGA1 313 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 CHST6Q9GZX3 395 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 CST9LQ9H4G1 147 aa1.41□□□□□ -2.18
HMGB1P28-201ENST00000507778 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 IGKV2-29A2NJV5 120 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 SMIM23A6NLE4 172 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 M0R036 132 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 OR5G3P0C626 314 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 SULT1A3P0DMM9 295 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 SULT1A4P0DMN0 295 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 MAGEA12P43365 314 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 AQP4P55087 323 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 PMAIP1Q13794 54 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 HIST3H3Q16695 136 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 HIST2H3PS2Q5TEC6 136 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 C8orf74Q6P047 294 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 DEFB119Q8N690 84 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 ZNF676Q8N7Q3 588 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 ERMAPQ96PL5 475 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 HSPB9Q9BQS6 159 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 NAA38Q9BRA0 125 aaKnown RBP1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 MRPL32Q9BYC8 188 aaKnown RBP1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 OR8D2Q9GZM6 311 aa1.4□□□□□ -2.19
HMGB1P28-201ENST00000507778 SCAF11Q99590 1463 aaKnown RBP1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 DICER1Q9UPY3 1922 aaKnown RBP1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 MEIS3P1A6NDR6 274 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 GGT3PA6NGU5 568 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 CIAO1O76071 339 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 IGHV3-7P01780 117 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 C1QAP02745 245 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 TRGC1P0CF51 173 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 ZNF705BP0CI00 300 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 HIST1H1EP10412 219 aaKnown RBP1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 FGF6P10767 208 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 GPX2P18283 190 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 UBE2IP63279 158 aaKnown RBP1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 OR2F1Q13607 317 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 GRK1Q15835 563 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 FAM27BQ5VT28 67 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 C1orf158Q8N1D5 194 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 OR5B17Q8NGF7 314 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 SLC35B4Q969S0 331 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 EFCAB1Q9HAE3 211 aa1.39□□□□□ -2.19
HMGB1P28-201ENST00000507778 SNAPC4Q5SXM2 1469 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 ADCY9O60503 1353 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 TRBV20OR9-2A0A075B6H5 130 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 A0A0J9YY10 115 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 A0A1B0GX78 115 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 OR51F1A6NGY5 319 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 EEF1E1-BLOC1S5C9J1V9 151 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 F8W036 122 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 TRAPPC2LH3BP13 241 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 SLC22A1O15245 554 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 ORC5O43913 435 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 AKR1C3P42330 323 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 EVX1P49640 407 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 SPCS3P61009 180 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 GUK1Q16774 197 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 ALKAL1Q6UXT8 129 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 C7orf65Q6ZTY9 151 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 OR2T4Q8NH00 348 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 IL36BQ9NZH7 164 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 DSCAMO60469 2012 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 CHD5Q8TDI0 1954 aa1.38□□□□□ -2.19
HMGB1P28-201ENST00000507778 WDR90Q96KV7 1748 aa1.37□□□□□ -2.19
HMGB1P28-201ENST00000507778 GBF1Q92538 1859 aa1.37□□□□□ -2.19
HMGB1P28-201ENST00000507778 IRGMA1A4Y4 181 aa1.37□□□□□ -2.19
HMGB1P28-201ENST00000507778 IFITM2Q01629 132 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms