RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 IL6RP08887 468 aaPredicted RBP6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 HOXB5P09067 269 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 VDAC2P45880 294 aaPredicted RBP6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 AKR1C2P52895 323 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 ERVK-16P61578 105 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 ECSCRQ19T08 205 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 LYG2Q86SG7 212 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 SLC35G3Q8N808 338 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 TEX45Q8NA69 505 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 DUSP18Q8NEJ0 188 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 LFNGQ8NES3 379 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 OR2T6Q8NHC8 308 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 RNASE11Q8TAA1 199 aaKnown RBP6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 TMEM167AQ8TBQ9 72 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 FYTTD1Q96QD9 318 aaKnown RBP6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 HINT2Q9BX68 163 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 OR51J1Q9H342 316 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 RNF114Q9Y508 228 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 NUBP2Q9Y5Y2 271 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 VWFP04275 2813 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 TET2Q6N021 2002 aaPredicted RBP6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 A0A0B4J293 547 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 CLPSL1A2RUU4 121 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 MSGN1A6NI15 193 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 CGB1A6NKQ9 187 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 MPTX1A8MV57 137 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 CCSO14618 274 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 ADAP1O75689 374 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 NDUFA7O95182 113 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 SPDEFO95238 335 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 DEFA5Q01523 94 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 POU2AF1Q16633 256 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 C2orf68Q2NKX9 166 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 AWAT1Q58HT5 328 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 PLET1Q6UQ28 207 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 H2BFWTQ7Z2G1 175 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 Q8N2B8 174 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 KLHDC1Q8N7A1 406 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 OR5T1Q8NG75 326 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 OR10W1Q8NGF6 305 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 OR4F5Q8NH21 305 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 GALNT14Q96FL9 552 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 TMEM56Q96MV1 263 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 KRTAP4-12Q9BQ66 201 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 QTRT1Q9BXR0 403 aaKnown RBP6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 COMMD9Q9P000 198 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 TMEM56-RWDD3S4R434 201 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 TRRAPQ9Y4A5 3859 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 TEX50A0A1B0GTY4 177 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 TMEM89A2RUT3 159 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 PRH1P02810 166 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 REG1AP05451 166 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 P0C879 139 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 HLA-GP17693 338 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 RIPPLY3P57055 190 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 PROK1P58294 105 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 RPL8P62917 257 aaKnown RBP6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 ASPHD1Q5U4P2 390 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 ZNF562Q6V9R5 426 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 CENPVQ7Z7K6 275 aaPredicted RBP6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 MMD2Q8IY49 270 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 LGI3Q8N145 548 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 TCTEX1D1Q8N7M0 179 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 ZFAND2BQ8WV99 257 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 TMEM158Q8WZ71 300 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 ARPC1AQ92747 370 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 RBPMSQ93062 196 aaKnown RBP6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 RRNAD1Q96FB5 475 aaKnown RBP6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 C16orf95Q9H693 158 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 BET1LQ9NYM9 111 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 CACNG5Q9UF02 275 aa6.94□□□□□ -1.3
SCAMP1-202ENST00000506858 SOX15O60248 233 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 RBMXL2O75526 392 aaKnown RBP6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 SNAPC5O75971 98 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 ACTL6BO94805 426 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 CD28P10747 220 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 ANXA3P12429 323 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 AREGP15514 252 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 COMPP49747 757 aaPredicted RBP6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 TCTEX1D4Q5JR98 221 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 GGNBP1Q5YKI7 109 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 UNQ5815/PRO19632Q6UWF5 114 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 STPG2Q8N412 459 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 OR4A16Q8NH70 328 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 SRSF12Q8WXF0 261 aaKnown RBP6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 WDR89Q96FK6 387 aaPredicted RBP6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 MS4A10Q96PG2 267 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 MARVELD1Q9BSK0 173 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 KLK15Q9H2R5 256 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 OR51B2Q9Y5P1 312 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 MMP24Q9Y5R2 645 aa6.93□□□□□ -1.3
SCAMP1-202ENST00000506858 ANK2Q01484 3957 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 TRAV41A0A0B4J266 112 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 A0A1W2PN81 502 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 TEX22C9J3V5 150 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 ST8SIA3O43173 380 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 SIX6O95475 246 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 DUS4LO95620 317 aaKnown RBP6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 PTTG1O95997 202 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 CHRNA7P36544 502 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms