RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 PYDC2Q56P42 97 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 ZNF486Q96H40 463 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-209ENST00000506630 DNAH9Q9NYC9 4486 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 TRAV3A0A0B4J244 114 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 C13orf42A0A1B0GVH6 325 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 DPPA5A6NC42 116 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 HMX3A6NHT5 357 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 DUS4LO95620 317 aaKnown RBP10.15□□□□□ -0.78
TCOF1-209ENST00000506630 ZNF735P0CB33 412 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 PIGPP57054 158 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 RND3P61587 244 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 RUNX1Q01196 453 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 ZNF616Q08AN1 781 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 FHL3Q13643 280 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 ADAD2Q8NCV1 583 aaKnown RBP10.15□□□□□ -0.78
TCOF1-209ENST00000506630 OR1N2Q8NGR9 330 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 TERB2Q8NHR7 220 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 MARCH1Q8TCQ1 289 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 DPF1Q92782 380 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 SOSTQ9BQB4 213 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 V9GYH0 126 aa10.15□□□□□ -0.78
TCOF1-209ENST00000506630 A0A0G2JLM5 398 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 WI2-2373I1.2A0A1W2PRP0 233 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 ANKRD20A5PA0PJZ0 165 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 TEX22C9J3V5 150 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 E7EUB6 86 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 UPK2O00526 184 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 KRASP01116 189 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 PRH1P02810 166 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 OR8U8P0C7N1 319 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 G6PCP35575 357 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 ZNF585BQ52M93 769 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 CCDC190Q86UF4 302 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 SLC25A42Q86VD7 318 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 CCDC71LQ8N9Z2 235 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 OR13C8Q8NGS7 320 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 ZFAND1Q8TCF1 268 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 B9D2Q9BPU9 175 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 THAP7Q9BT49 309 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-209ENST00000506630 GPR61Q9BZJ8 451 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 COMMD5Q9GZQ3 224 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 FAM212BQ9NTI7 297 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-209ENST00000506630 MCUBQ9NWR8 336 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 NDUFA13Q9P0J0 144 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 COPZ2Q9P299 210 aa10.14□□□□□ -0.79
TCOF1-209ENST00000506630 IGHV4OR15-8A0A075B7B6 117 aa10.13□□□□□ -0.79
TCOF1-209ENST00000506630 A0A087WW49 117 aa10.13□□□□□ -0.79
TCOF1-209ENST00000506630 LINC01619G3V211 115 aa10.13□□□□□ -0.79
TCOF1-209ENST00000506630 IL6RP08887 468 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-209ENST00000506630 ECI1P42126 302 aa10.13□□□□□ -0.79
TCOF1-209ENST00000506630 DCTN2Q13561 401 aaKnown RBP10.13□□□□□ -0.79
TCOF1-209ENST00000506630 SPANXN2Q5MJ10 180 aa10.13□□□□□ -0.79
TCOF1-209ENST00000506630 Q8N402 240 aa10.13□□□□□ -0.79
TCOF1-209ENST00000506630 TTC9CQ8N5M4 171 aa10.13□□□□□ -0.79
TCOF1-209ENST00000506630 OR51S1Q8NGJ8 323 aa10.13□□□□□ -0.79
TCOF1-209ENST00000506630 PRRT1Q99946 306 aa10.13□□□□□ -0.79
TCOF1-209ENST00000506630 MCRIP2Q9BUT9 160 aaKnown RBP10.13□□□□□ -0.79
TCOF1-209ENST00000506630 C14orf166Q9Y224 244 aaKnown RBP10.13□□□□□ -0.79
TCOF1-209ENST00000506630 NSG2Q9Y328 171 aa10.13□□□□□ -0.79
TCOF1-209ENST00000506630 A0A1B0GW64 132 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 ANKRD34BA5PLL1 514 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 H0Y980 276 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 SNAPC5O75971 98 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 BRI3O95415 125 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 REG1AP05451 166 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 SERPINE2P07093 398 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 CTSDP07339 412 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-209ENST00000506630 AREGP15514 252 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 SLURP1P55000 103 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 OR2B8PP59922 312 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 ZNF79Q15937 498 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 C19orf35Q6ZS72 473 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 TRIM63Q969Q1 353 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 MRGPRFQ96AM1 343 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 SCP2D1Q9UJQ7 156 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 ZNF257Q9Y2Q1 563 aa10.12□□□□□ -0.79
TCOF1-209ENST00000506630 C3orf85A0A1B0GTC6 90 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 CGB1A6NKQ9 187 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 NPIPB5A8MRT5 1133 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 OR2J3O76001 311 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 HSPB1P04792 205 aaKnown RBP10.11□□□□□ -0.79
TCOF1-209ENST00000506630 PTBP1P26599 531 aaKnown RBP eCLIP10.11□□□□□ -0.79
TCOF1-209ENST00000506630 PSMB6P28072 239 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 HOXD3P31249 432 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-209ENST00000506630 FAUP35544 74 aaKnown RBP10.11□□□□□ -0.79
TCOF1-209ENST00000506630 AP3S2P59780 193 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 KRTAP10-11P60412 298 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 RHOGP84095 191 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 ZNF45Q02386 682 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 SURF2Q15527 256 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-209ENST00000506630 TRIM16LQ309B1 348 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 H2BFWTQ7Z2G1 175 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 TOMM5Q8N4H5 51 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 OR6Q1Q8NGQ2 317 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 USMG5Q96IX5 58 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 TP53RKQ96S44 253 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 TSC22D3Q99576 134 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 HINT2Q9BX68 163 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 QTRT1Q9BXR0 403 aaKnown RBP10.11□□□□□ -0.79
TCOF1-209ENST00000506630 AKIP1Q9NQ31 210 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms