RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 TMEM61Q8N0U2 210 aa9.16□□□□□ -0.94
SNHG4-202ENST00000505522 BEST4Q8NFU0 473 aa9.16□□□□□ -0.94
SNHG4-202ENST00000505522 OR13F1Q8NGS4 319 aa9.16□□□□□ -0.94
SNHG4-202ENST00000505522 EEF1AKMT3Q96AZ1 226 aa9.16□□□□□ -0.94
SNHG4-202ENST00000505522 SLC25A38Q96DW6 304 aa9.16□□□□□ -0.94
SNHG4-202ENST00000505522 RNF167Q9H6Y7 350 aa9.16□□□□□ -0.94
SNHG4-202ENST00000505522 BET1LQ9NYM9 111 aa9.16□□□□□ -0.94
SNHG4-202ENST00000505522 SSR3Q9UNL2 185 aa9.16□□□□□ -0.94
SNHG4-202ENST00000505522 HYDINQ4G0P3 5121 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 TRAV3A0A0B4J244 114 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 A8MWP6 167 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 SULT1C2O00338 296 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 DHFRP00374 187 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 PPYP01298 95 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 FCER2P06734 321 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 DEFA4P12838 97 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 HIST1H1BP16401 226 aaKnown RBP9.15□□□□□ -0.94
SNHG4-202ENST00000505522 OR2B8PP59922 312 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 MSMO1Q15800 293 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 FAM106AQ4KMX7 169 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 TM4SF20Q53R12 229 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 ZNF57Q68EA5 555 aaPredicted RBP9.15□□□□□ -0.94
SNHG4-202ENST00000505522 HOGA1Q86XE5 327 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 SPAG16Q8N0X2 631 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 UXS1Q8NBZ7 420 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 IL17DQ8TAD2 202 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 FCGR1BQ92637 280 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 HRASLSQ9HDD0 168 aa9.15□□□□□ -0.94
SNHG4-202ENST00000505522 TRBV7-1A0A0A6YYK4 115 aa9.14□□□□□ -0.95
SNHG4-202ENST00000505522 SCAF4O95104 1147 aaKnown RBP9.14□□□□□ -0.95
SNHG4-202ENST00000505522 CLEC3BP05452 202 aa9.14□□□□□ -0.95
SNHG4-202ENST00000505522 IDNKQ5T6J7 187 aa9.14□□□□□ -0.95
SNHG4-202ENST00000505522 UNQ9165/PRO28630Q6UXU0 137 aa9.14□□□□□ -0.95
SNHG4-202ENST00000505522 ZNF818PQ6ZRF7 136 aa9.14□□□□□ -0.95
SNHG4-202ENST00000505522 SLC16A13Q7RTY0 426 aa9.14□□□□□ -0.95
SNHG4-202ENST00000505522 OR52B4Q8NGK2 314 aa9.14□□□□□ -0.95
SNHG4-202ENST00000505522 OR4A5Q8NH83 315 aa9.14□□□□□ -0.95
SNHG4-202ENST00000505522 SLC5A7Q9GZV3 580 aa9.14□□□□□ -0.95
SNHG4-202ENST00000505522 ETV7Q9Y603 341 aa9.14□□□□□ -0.95
SNHG4-202ENST00000505522 IGLC7A0M8Q6 106 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 UPK2O00526 184 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 RBFOX2O43251 390 aaKnown RBP eCLIP9.13□□□□□ -0.95
SNHG4-202ENST00000505522 JTBO76095 146 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 HPRT1P00492 218 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 GPR183P32249 361 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 SCAND1P57086 179 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 TAS2R31P59538 309 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 FXYD4P59646 89 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 POU2AF1Q16633 256 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 BTNL8Q6UX41 500 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 ZBTB34Q8NCN2 500 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 ZNF502Q8TBZ5 544 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 CXorf58Q96LI9 332 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 AIFM2Q9BRQ8 373 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 AUNIPQ9H7T9 357 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 ALMS1Q8TCU4 4167 aa9.13□□□□□ -0.95
SNHG4-202ENST00000505522 A0A0A6YYH2 397 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 IGHV3-35A0A0C4DH35 117 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 LOC100506127A0A0U1RQW1 187 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 MEIS3P1A6NDR6 274 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 A6NJ64 397 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 S1PR2O95136 353 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 C8orf88P0DMB2 117 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 RPA2P15927 270 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 NQO2P16083 231 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 CATR1Q13166 79 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 ZNF585BQ52M93 769 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 TMEM17Q86X19 198 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 OR10W1Q8NGF6 305 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 OR51H1Q8NH63 302 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 GIMAP1Q8WWP7 306 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 OVOL2Q9BRP0 275 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 GGTLC1Q9BX51 225 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 COMMD5Q9GZQ3 224 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 TMEM140Q9NV12 185 aa9.12□□□□□ -0.95
SNHG4-202ENST00000505522 ATP6V1G2O95670 118 aa9.11□□□□□ -0.95
SNHG4-202ENST00000505522 AADACL3Q5VUY0 350 aa9.11□□□□□ -0.95
SNHG4-202ENST00000505522 PLET1Q6UQ28 207 aa9.11□□□□□ -0.95
SNHG4-202ENST00000505522 DMBX1Q8NFW5 382 aa9.11□□□□□ -0.95
SNHG4-202ENST00000505522 OR5AP2Q8NGF4 316 aa9.11□□□□□ -0.95
SNHG4-202ENST00000505522 SRSF8Q9BRL6 282 aaKnown RBP9.11□□□□□ -0.95
SNHG4-202ENST00000505522 QTRT1Q9BXR0 403 aaKnown RBP9.11□□□□□ -0.95
SNHG4-202ENST00000505522 YTHDF1Q9BYJ9 559 aaKnown RBP9.11□□□□□ -0.95
SNHG4-202ENST00000505522 PLEKHA2Q9HB19 425 aa9.11□□□□□ -0.95
SNHG4-202ENST00000505522 DIABLOQ9NR28 239 aa9.11□□□□□ -0.95
SNHG4-202ENST00000505522 BIRC6Q9NR09 4857 aa9.11□□□□□ -0.95
SNHG4-202ENST00000505522 LOC102724200A0A096LPH7 203 aaPredicted RBP9.1□□□□□ -0.95
SNHG4-202ENST00000505522 TRAV25A0A0B4J276 109 aa9.1□□□□□ -0.95
SNHG4-202ENST00000505522 TEX50A0A1B0GTY4 177 aa9.1□□□□□ -0.95
SNHG4-202ENST00000505522 TGOLN2O43493 480 aa9.1□□□□□ -0.95
SNHG4-202ENST00000505522 PTBP1P26599 531 aaKnown RBP eCLIP9.1□□□□□ -0.953e-72■■■□□ 16.3
SNHG4-202ENST00000505522 GNRHRP30968 328 aa9.1□□□□□ -0.95
SNHG4-202ENST00000505522 ELLP55199 621 aaPredicted RBP9.1□□□□□ -0.95
SNHG4-202ENST00000505522 WT1-ASQ06250 92 aa9.1□□□□□ -0.95
SNHG4-202ENST00000505522 ANKRD55Q3KP44 614 aa9.1□□□□□ -0.95
SNHG4-202ENST00000505522 RBPMS2Q6ZRY4 209 aaKnown RBP9.1□□□□□ -0.95
SNHG4-202ENST00000505522 OR1L6Q8NGR2 347 aa9.1□□□□□ -0.95
SNHG4-202ENST00000505522 CD300LFQ8TDQ1 290 aa9.1□□□□□ -0.95
SNHG4-202ENST00000505522 MARC2Q969Z3 335 aa9.1□□□□□ -0.95
SNHG4-202ENST00000505522 ZNF436Q9C0F3 470 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms