RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 LAMA5O15230 3695 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 TRGV5A0A0B4J1U4 118 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 SPINK4O60575 86 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 TNFSF13O75888 250 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 CGAP01215 116 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 EAF1Q96JC9 268 aaPredicted RBP9.8□□□□□ -0.84
UBE3D-206ENST00000505226 TMEM140Q9NV12 185 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 V9GYV3 84 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 A0A1B0GWJ7 208 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 ZNF891A8MT65 544 aaPredicted RBP9.8□□□□□ -0.84
UBE3D-206ENST00000505226 FCN1O00602 326 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 SPINT2O43291 252 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 TNFSF15O95150 251 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 NPSP0C0P6 89 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 LOXL3P58215 753 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 TPPP2P59282 170 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 SPRNQ5BIV9 151 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 Q8N976 141 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 BTF3L4Q96K17 158 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 C20orf144Q9BQM9 153 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 TCF19Q9Y242 345 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 NCOR1O75376 2440 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 IGKV1D-17A0A075B6S4 117 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 KLRC4-KLRK1H3BQV0 150 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 PRDX2P32119 198 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 ASPHD1Q5U4P2 390 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 MIR17HGQ75NE6 70 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 MOB3BQ86TA1 216 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 OR4P4Q8NGL7 312 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 MIEN1Q9BRT3 115 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 ZPBPQ9BS86 351 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 IFI27L2Q9H2X8 130 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 GNG12Q9UBI6 72 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 FBXL7Q9UJT9 491 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 KLF13Q9Y2Y9 288 aaPredicted RBP9.79□□□□□ -0.84
UBE3D-206ENST00000505226 ADH4P08319 380 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 PAFAH1B2P68402 229 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 MMD2Q8IY49 270 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 OR8I2Q8N0Y5 310 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 OR52E5Q8NH55 327 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 TXNDC17Q9BRA2 123 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 GNB4Q9HAV0 340 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 NPVFQ9HCQ7 196 aa9.79□□□□□ -0.84
UBE3D-206ENST00000505226 SNURFLB1AK76 121 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 TIMM8AO60220 97 aaPredicted RBP9.78□□□□□ -0.84
UBE3D-206ENST00000505226 ACTL6BO94805 426 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 IGFBP2P18065 325 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 SLC35B1P78383 322 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 LRRC29Q8WV35 223 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 C11orf52Q96A22 123 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 GMPPAQ96IJ6 420 aaPredicted RBP9.78□□□□□ -0.84
UBE3D-206ENST00000505226 TNCP24821 2201 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 IGHV3OR15-7A0A075B7D8 119 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 IGKV3-15P01624 115 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 LINC00869P0C866 280 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 BRS3P32247 399 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 KIAA1644Q3SXP7 199 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 BAGE3Q86Y29 109 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 BAGE2Q86Y30 109 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 DDB2Q92466 427 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 RNASE7Q9H1E1 156 aaKnown RBP9.78□□□□□ -0.84
UBE3D-206ENST00000505226 DUSP13Q9UII6 198 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 TECTAO75443 2155 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 TRGV10A0A0A0MS01 117 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 FAM90A9PA6NNJ1 464 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 MSMPQ1L6U9 139 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 SMIM21Q3B7S5 101 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 DOLPP1Q86YN1 238 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 ZNRF1Q8ND25 227 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 OR5AU1Q8NGC0 362 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 ZNF503Q96F45 646 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 RCHY1Q96PM5 261 aa9.78□□□□□ -0.84
UBE3D-206ENST00000505226 FAM103A1Q9BTL3 118 aaKnown RBP9.78□□□□□ -0.84
UBE3D-206ENST00000505226 OPN3Q9H1Y3 402 aaPredicted RBP9.78□□□□□ -0.84
UBE3D-206ENST00000505226 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.77□□□□□ -0.85
UBE3D-206ENST00000505226 TNFSF10P50591 281 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 RPP30P78346 268 aaKnown RBP9.77□□□□□ -0.85
UBE3D-206ENST00000505226 Q0VG73 95 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 INO80CQ6PI98 192 aaPredicted RBP9.77□□□□□ -0.85
UBE3D-206ENST00000505226 CHODLQ9H9P2 273 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 C9JCJ5 164 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 DLEU1O43261 78 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 LAMTOR5O43504 91 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 CA2P00918 260 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 CECR9P0C854 216 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 CRYBB3P26998 211 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 PRR20EP86478 221 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 PRR20CP86479 221 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 PRR20DP86480 221 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 PRR20BP86481 221 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 PRR20AP86496 221 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 FXYD3Q14802 87 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 VWA1Q6PCB0 445 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 TEPPQ6URK8 271 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 DCAF16Q9NXF7 216 aa9.77□□□□□ -0.85
UBE3D-206ENST00000505226 HEATR1Q9H583 2144 aaKnown RBP9.77□□□□□ -0.85
UBE3D-206ENST00000505226 IGKV1OR2-108A0A075B7D4 117 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 RPLP1P05386 114 aaKnown RBP9.76□□□□□ -0.85
UBE3D-206ENST00000505226 GPX1P07203 203 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 GATA2P23769 480 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms