RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	HOGA1	Q86XE5	327 aa		12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	CMTM1	Q8IZ96	169 aa		12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	UXS1	Q8NBZ7	420 aa		12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	S100A16	Q96FQ6	103 aa	Known RBP	12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	THAP7	Q9BT49	309 aa	Predicted RBP	12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	HIPK2	Q9H2X6	1198 aa		12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	CCL28	Q9NRJ3	127 aa		12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	TRAV25	A0A0B4J276	109 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	ZNF785	A8K8V0	405 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	SULT1C2	O00338	296 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	RBMXL2	O75526	392 aa	Known RBP	12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	SNAPC5	O75971	98 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	NDUFB8	O95169	186 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	CLEC3B	P05452	202 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	IL6R	P08887	468 aa	Predicted RBP	12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	CD7	P09564	240 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	AREG	P15514	252 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	LAMTOR1	Q6IAA8	161 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	NR2C2AP	Q86WQ0	139 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	TMEM17	Q86X19	198 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	WDR89	Q96FK6	387 aa	Predicted RBP	12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	GGTLC1	Q9BX51	225 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	VCX3A	Q9NNX9	186 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	ZC4H2	Q9NQZ6	224 aa		12.37	□□□□□ -0.43
DDR1-256	ENST00000505066	SSX5	O60225	188 aa		12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	REG1A	P05451	166 aa		12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	CTRB1	P17538	263 aa		12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	CTRB2	Q6GPI1	263 aa		12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	ZNF773	Q6PK81	442 aa		12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	ADAMTSL5	Q6ZMM2	481 aa		12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	OR5AP2	Q8NGF4	316 aa		12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	OR1L6	Q8NGR2	347 aa		12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	OR51H1	Q8NH63	302 aa		12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	FAM110A	Q9BQ89	295 aa		12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	QTRT1	Q9BXR0	403 aa	Known RBP	12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	MRPL27	Q9P0M9	148 aa	Known RBP	12.36	□□□□□ -0.43
DDR1-256	ENST00000505066		S4R3C0	116 aa		12.36	□□□□□ -0.43
DDR1-256	ENST00000505066	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.35	□□□□□ -0.43
DDR1-256	ENST00000505066		A8MWP6	167 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	SCAF4	O95104	1147 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	TRAPPC2	P0DI81	140 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	TRAPPC2B	P0DI82	140 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	GPR183	P32249	361 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	APOC4	P55056	127 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	ELL	P55199	621 aa	Predicted RBP	12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	GIMAP1	Q8WWP7	306 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	HINT2	Q9BX68	163 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	AUNIP	Q9H7T9	357 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	PLEKHA2	Q9HB19	425 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	RETN	Q9HD89	108 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	GAR1	Q9NY12	217 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	FKBP11	Q9NYL4	201 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	COMMD9	Q9P000	198 aa		12.35	□□□□□ -0.43
DDR1-256	ENST00000505066	UPK2	O00526	184 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	IGLV2-14	P01704	120 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	FGF2	P09038	288 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	PTBP1	P26599	531 aa	Known RBP eCLIP	12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	TAS2R46	P59540	309 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	OR2B8P	P59922	312 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	ZNF585B	Q52M93	769 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	SLC25A24	Q6NUK1	477 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	TMEM61	Q8N0U2	210 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	GVQW1	Q8N7I0	195 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	OR1L8	Q8NGR8	309 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	FANCD2OS	Q96PS1	177 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	TMEM140	Q9NV12	185 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	EHF	Q9NZC4	300 aa		12.34	□□□□□ -0.43
DDR1-256	ENST00000505066	IGLV11-55	A0A075B6I3	123 aa		12.33	□□□□□ -0.44
DDR1-256	ENST00000505066	FCER2	P06734	321 aa		12.33	□□□□□ -0.44
DDR1-256	ENST00000505066	OR13C7	P0DN81	318 aa		12.33	□□□□□ -0.44
DDR1-256	ENST00000505066	NEDD8	Q15843	81 aa		12.33	□□□□□ -0.44
DDR1-256	ENST00000505066	BTNL8	Q6UX41	500 aa		12.33	□□□□□ -0.44
DDR1-256	ENST00000505066	OR2C3	Q8N628	320 aa		12.33	□□□□□ -0.44
DDR1-256	ENST00000505066	OR5H2	Q8NGV7	314 aa		12.33	□□□□□ -0.44
DDR1-256	ENST00000505066	VN1R17P	Q8TDU5	208 aa		12.33	□□□□□ -0.44
DDR1-256	ENST00000505066	CACNG8	Q8WXS5	425 aa		12.33	□□□□□ -0.44
DDR1-256	ENST00000505066	CCDC140	Q96MF4	163 aa		12.33	□□□□□ -0.44
DDR1-256	ENST00000505066	TMEM56	Q96MV1	263 aa		12.33	□□□□□ -0.44
DDR1-256	ENST00000505066	SMIM31	A0A1B0GVY4	71 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	RBMY1B	A6NDE4	496 aa	Known RBP	12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	RBMY1E	A6NEQ0	496 aa	Known RBP	12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	ATP6V1G2	O95670	118 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	RBMY1D	P0C7P1	496 aa	Known RBP	12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	TM4SF20	Q53R12	229 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	TMEM69	Q5SWH9	247 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	LPCAT3	Q6P1A2	487 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	SPSB3	Q6PJ21	355 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	LINC00322	Q6ZN03	302 aa	Predicted RBP	12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	C19orf35	Q6ZS72	473 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	TMEM217	Q8N7C4	229 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	GDPD1	Q8N9F7	314 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	OR6F1	Q8NGZ6	308 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	LSM10	Q969L4	123 aa	Known RBP	12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	BSCL2	Q96G97	398 aa	Predicted RBP	12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	GPHA2	Q96T91	129 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	TSC22D3	Q99576	134 aa		12.32	□□□□□ -0.44
DDR1-256	ENST00000505066	TMEM213	A2RRL7	107 aa		12.31	□□□□□ -0.44
DDR1-256	ENST00000505066	OR4C46	A6NHA9	309 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms