RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CD83Q01151 205 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 OR5M8Q8NGP6 311 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 C19orf24Q9BVV8 132 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 PRNDQ9UKY0 176 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 IGLV11-55A0A075B6I3 123 aa6.46□□□□□ -1.37
CDC42SE2-208ENST00000505065 PJVKQ0ZLH3 352 aa6.46□□□□□ -1.37
CDC42SE2-208ENST00000505065 FOXL1Q12952 345 aa6.46□□□□□ -1.37
CDC42SE2-208ENST00000505065 Q6ZNX1 250 aa6.46□□□□□ -1.37
CDC42SE2-208ENST00000505065 LGI3Q8N145 548 aa6.46□□□□□ -1.37
CDC42SE2-208ENST00000505065 FBXL15Q9H469 300 aa6.46□□□□□ -1.37
CDC42SE2-208ENST00000505065 NUDT15Q9NV35 164 aa6.46□□□□□ -1.37
CDC42SE2-208ENST00000505065 FKBP11Q9NYL4 201 aa6.46□□□□□ -1.37
CDC42SE2-208ENST00000505065 WNK2Q9Y3S1 2297 aa6.46□□□□□ -1.37
CDC42SE2-208ENST00000505065 ATP6V0E1O15342 81 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 WIPF1O43516 503 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 PGAM2P15259 253 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 PMS2P5A8MQ11 134 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 F8W735 103 aaPredicted RBP6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 G3V3Q6 166 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 SLC25A17O43808 307 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 ATG12O94817 140 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 SULT1A3P0DMM9 295 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 SULT1A4P0DMN0 295 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 S100GP29377 79 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 MFAP2P55001 183 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 ATP5IP56385 69 aaPredicted RBP6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 SPATA3Q8NHX4 192 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 ARPC1AQ92747 370 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 BTBD17A6NE02 478 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 MDKP21741 143 aaPredicted RBP6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 G6PCP35575 357 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 DEFA1P59665 94 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 DEFA3P59666 94 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 RPL8P62917 257 aaKnown RBP6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 MMDQ15546 238 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 C2orf68Q2NKX9 166 aa6.46□□□□□ -1.38
CDC42SE2-208ENST00000505065 AP4M1O00189 453 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 RBMXL2O75526 392 aaKnown RBP6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 ELANEP08246 267 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 WT1-ASQ06250 92 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 CBX3Q13185 183 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 OR2C3Q8N628 320 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 MCUBQ9NWR8 336 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 SHOXO15266 292 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 TAS2R30P59541 319 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 ABCA11PQ4W5N1 156 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 RBMS3Q6XE24 437 aaKnown RBP6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 LYZL2Q7Z4W2 148 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 TMEM158Q8WZ71 300 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 RASL11BQ9BPW5 248 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 HIVEP2P31629 2446 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 LY86O95711 162 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 PAX9P55771 341 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 SMCO1Q147U7 214 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 LY6EQ16553 131 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 VKORC1L1Q8N0U8 176 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 SRSF12Q8WXF0 261 aaKnown RBP6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 NMES1Q9C002 83 aa6.45□□□□□ -1.38
CDC42SE2-208ENST00000505065 I3L521 148 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 ST8SIA3O43173 380 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 ANXA3P12429 323 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 PSMB6P28072 239 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 SPCS3P61009 180 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 RPS16P62249 146 aaKnown RBP6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 OR1L8Q8NGR8 309 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 MDFIQ99750 246 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 BEX1Q9HBH7 125 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 KIAA1456Q9P272 454 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 KCNIP3Q9Y2W7 256 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 HSPE1P61604 102 aaKnown RBP6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 SP6Q3SY56 376 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 ETV3LQ6ZN32 361 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 ZNF491Q8N8L2 437 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 QTRT1Q9BXR0 403 aaKnown RBP6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 SERPINE2P07093 398 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 TRAPPC2P0DI81 140 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 TRAPPC2BP0DI82 140 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 C2orf83Q53S99 150 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 GGNBP1Q5YKI7 109 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 POC5Q8NA72 575 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 OR52B4Q8NGK2 314 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 GON7Q9BXV9 100 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 ZFP57Q9NU63 452 aa6.44□□□□□ -1.38
CDC42SE2-208ENST00000505065 TRAV41A0A0B4J266 112 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 FAM240BA0A1B0GVZ2 78 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 FNDC10F2Z333 226 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 TMEM268Q5VZI3 342 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 SLC35E3Q7Z769 313 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 NDUFA11Q86Y39 141 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 OR10C1Q96KK4 312 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 OR51B2Q9Y5P1 312 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 FAM223BA6NKX1 122 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 MPTX1A8MV57 137 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 I3L2K1 104 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 FBXO24O75426 580 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 TNFRSF9Q07011 255 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 RGS21Q2M5E4 152 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 VWC2Q2TAL6 325 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 FAM223AQ8IWN6 122 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms