RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 APELAP0DMC3 54 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 HLA-GP17693 338 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 ERVK-16P61578 105 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 RPL8P62917 257 aaKnown RBP13.12□□□□□ -0.31
SYNE4-207ENST00000505054 KIAA0141Q14154 515 aaPredicted RBP13.12□□□□□ -0.31
SYNE4-207ENST00000505054 SP6Q3SY56 376 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 CASTOR1Q8WTX7 329 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 TMEM230Q96A57 120 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 SEC22AQ96IW7 307 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 ZFP57Q9NU63 452 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 TNCP24821 2201 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 TEX22C9J3V5 150 aa13.11□□□□□ -0.31
SYNE4-207ENST00000505054 E7EUB6 86 aa13.11□□□□□ -0.31
SYNE4-207ENST00000505054 SERPINE2P07093 398 aa13.11□□□□□ -0.31
SYNE4-207ENST00000505054 PF4V1P10720 104 aa13.11□□□□□ -0.31
SYNE4-207ENST00000505054 MAS1LP35410 378 aa13.11□□□□□ -0.31
SYNE4-207ENST00000505054 RPL27AP46776 148 aaKnown RBP13.11□□□□□ -0.31
SYNE4-207ENST00000505054 INPP1P49441 399 aa13.11□□□□□ -0.31
SYNE4-207ENST00000505054 CADM3Q8N126 398 aa13.11□□□□□ -0.31
SYNE4-207ENST00000505054 ADAD2Q8NCV1 583 aaKnown RBP13.11□□□□□ -0.31
SYNE4-207ENST00000505054 OR5M8Q8NGP6 311 aa13.11□□□□□ -0.31
SYNE4-207ENST00000505054 PHB2Q99623 299 aa13.11□□□□□ -0.31
SYNE4-207ENST00000505054 NAA60Q9H7X0 242 aa13.11□□□□□ -0.31
SYNE4-207ENST00000505054 LINC00854A0A1B0GVQ3 168 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 CRYM-AS1A6NIL9 109 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 CGB1A6NKQ9 187 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 OR5AC1P0C628 307 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 OR9G9P0C7N8 305 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 CD33P20138 364 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 UCP1P25874 307 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 RAB9AP51151 201 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 OR5T1Q8NG75 326 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 S100ZQ8WXG8 99 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 TMEM68Q96MH6 324 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 SCGB3A2Q96PL1 93 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 SPIN2AQ99865 258 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 SPIN2BQ9BPZ2 258 aa13.1□□□□□ -0.31
SYNE4-207ENST00000505054 COL7A1Q02388 2944 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 TEX13DA0A0J9YY54 714 aaPredicted RBP13.09□□□□□ -0.31
SYNE4-207ENST00000505054 HMX3A6NHT5 357 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 B3GALNT1O75752 331 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 IGKV1-5P01602 117 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 FGF2P09038 288 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 BTCP35070 178 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 CDX1P47902 265 aaPredicted RBP13.09□□□□□ -0.31
SYNE4-207ENST00000505054 CCR6P51684 374 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 OR2B8PP59922 312 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 TMEM65Q6PI78 240 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 C8orf86Q6ZUL3 223 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 ZNF695Q8IW36 515 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 KLHL30-AS1Q8NEE0 82 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 GLYATL2Q8WU03 294 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 CCDC32Q9BV29 185 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 TMEM222Q9H0R3 208 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 NSG2Q9Y328 171 aa13.09□□□□□ -0.31
SYNE4-207ENST00000505054 NAP1L6A6NFF2 107 aa13.08□□□□□ -0.32
SYNE4-207ENST00000505054 DBX1A6NMT0 343 aa13.08□□□□□ -0.32
SYNE4-207ENST00000505054 NUDT19A8MXV4 375 aa13.08□□□□□ -0.32
SYNE4-207ENST00000505054 P0C879 139 aa13.08□□□□□ -0.32
SYNE4-207ENST00000505054 SUPT4H1P63272 117 aaKnown RBP13.08□□□□□ -0.32
SYNE4-207ENST00000505054 TRIM16LQ309B1 348 aa13.08□□□□□ -0.32
SYNE4-207ENST00000505054 ETV3LQ6ZN32 361 aa13.08□□□□□ -0.32
SYNE4-207ENST00000505054 ZNF491Q8N8L2 437 aa13.08□□□□□ -0.32
SYNE4-207ENST00000505054 WFDC9Q8NEX5 89 aa13.08□□□□□ -0.32
SYNE4-207ENST00000505054 LHFPL5Q8TAF8 219 aa13.08□□□□□ -0.32
SYNE4-207ENST00000505054 MS4A10Q96PG2 267 aa13.08□□□□□ -0.32
SYNE4-207ENST00000505054 FYTTD1Q96QD9 318 aaKnown RBP13.08□□□□□ -0.32
SYNE4-207ENST00000505054 SLC25A21Q9BQT8 299 aaPredicted RBP13.08□□□□□ -0.32
SYNE4-207ENST00000505054 GNB4Q9HAV0 340 aa13.08□□□□□ -0.32
SYNE4-207ENST00000505054 H3BUA1 57 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 K7EIL1 84 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 PLA2G10O15496 165 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 AREGP15514 252 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 IGLL1P15814 213 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 RBMS2Q15434 407 aaKnown RBP13.07□□□□□ -0.32
SYNE4-207ENST00000505054 IZUMO4Q1ZYL8 232 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 C19orf35Q6ZS72 473 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 H2BFWTQ7Z2G1 175 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 SGPP2Q8IWX5 399 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 GALNT14Q96FL9 552 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 UBE2E2Q96LR5 201 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 C7orf50Q9BRJ6 194 aaKnown RBP13.07□□□□□ -0.32
SYNE4-207ENST00000505054 COMMD5Q9GZQ3 224 aa13.07□□□□□ -0.32
SYNE4-207ENST00000505054 RYR3Q15413 4870 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 A0A0G2JRQ6 117 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 TEX50A0A1B0GTY4 177 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 C15orf61A6NNL5 157 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 RBMXL2O75526 392 aaKnown RBP13.06□□□□□ -0.32
SYNE4-207ENST00000505054 SNAPC5O75971 98 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 BRI3O95415 125 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 CDS2O95674 445 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 TRGV3P03979 118 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 AKR1C4P17516 323 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 CD40LGP29965 261 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 SLC6A1P30531 599 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 TPPP2P59282 170 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 TMEM187Q14656 261 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 DEFB136Q30KP8 78 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 TMED4Q7Z7H5 227 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 TTC9CQ8N5M4 171 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms