RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 TRAV3A0A0B4J244 114 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 IGHG4P01861 327 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 CD28P10747 220 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 HLA-GP17693 338 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 SLC6A1P30531 599 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 TMEM187Q14656 261 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 TRIM16LQ309B1 348 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 TCTEX1D4Q5JR98 221 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 MZT2BQ6NZ67 158 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 TEX38Q6PEX7 206 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 RNF152Q8N8N0 203 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 LFNGQ8NES3 379 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 OR4X2Q8NGF9 303 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 GRPEL2Q8TAA5 225 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 TMEM56Q96MV1 263 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 TSC22D3Q99576 134 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 SPIN2AQ99865 258 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 SPIN2BQ9BPZ2 258 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 FAM103A1Q9BTL3 118 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 TMEM56-RWDD3S4R434 201 aa9.33□□□□□ -0.92
PDLIM5-208ENST00000504489 MSGN1A6NI15 193 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 SNAPC5O75971 98 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 IGKV1-5P01602 117 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 IGLV1-40P01703 118 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 TCRBP04435 133 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 ELANEP08246 267 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 OR9G9P0C7N8 305 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 P0C879 139 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 ANXA3P12429 323 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 RPL27AP46776 148 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 FOXE3Q13461 319 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 ECSCRQ19T08 205 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 UNQ5815/PRO19632Q6UWF5 114 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 H2BFWTQ7Z2G1 175 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 SELENOHQ8IZQ5 122 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 C11orf44Q8N8P7 122 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 OR5M8Q8NGP6 311 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 LHFPL5Q8TAF8 219 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 RBPMSQ93062 196 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 IL22RA2Q969J5 263 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 CITED2Q99967 270 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 FKBP11Q9NYL4 201 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 PRNDQ9UKY0 176 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 FLVCR2Q9UPI3 526 aa9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 FOXA2Q9Y261 457 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-208ENST00000504489 PIGBOS1A0A0B4J2F0 54 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 FAM240BA0A1B0GVZ2 78 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 A0A1W2PN81 502 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 E7EUB6 86 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 OPN1MWP04001 364 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 OPN1MW2P0DN77 364 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 OPN1MW3P0DN78 364 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 PSMB8P28062 276 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 CHRNA7P36544 502 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 AKR1C2P52895 323 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 OR2B8PP59922 312 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 SRPXP78539 464 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 PPP1R1AQ13522 171 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 C10orf55Q5SWW7 151 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 ASPHD1Q5U4P2 390 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 NDUFA11Q86Y39 141 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 ZNF695Q8IW36 515 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 FAM219AQ8IW50 185 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 LGI3Q8N145 548 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 RRNAD1Q96FB5 475 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 COMMD5Q9GZQ3 224 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 ALX4Q9H161 411 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 ZFP57Q9NU63 452 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 TMEM14BQ9NUH8 114 aa9.31□□□□□ -0.92
PDLIM5-208ENST00000504489 TEX50A0A1B0GTY4 177 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 A0A1B0GW64 132 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 TCRBV4S1A1TA0A5B7 111 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 CGB1A6NKQ9 187 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 C15orf61A6NNL5 157 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 TEX22C9J3V5 150 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 SOX15O60248 233 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 BRI3O95415 125 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 SFT2D2O95562 160 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 MYOD1P15172 320 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 VAMP1P23763 118 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 DEFA1P59665 94 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 DEFA3P59666 94 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 CXorf66Q5JRM2 361 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 TMEM268Q5VZI3 342 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 THOC7Q6I9Y2 204 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 OR1L8Q8NGR8 309 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 OR4A16Q8NH70 328 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 LSM10Q969L4 123 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 PHB2Q99623 299 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 SRSF8Q9BRL6 282 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 C20orf85Q9H1P6 137 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 NSG2Q9Y328 171 aa9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 TSSC4Q9Y5U2 329 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-208ENST00000504489 A0A0B4J293 547 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 A0A0B4J2A0 478 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 A0A0G2JRQ6 117 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 C9orf170A2RU37 121 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 ADARB2-AS1A8MUL3 147 aa9.29□□□□□ -0.92
PDLIM5-208ENST00000504489 H3BUA1 57 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms