RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 TET2Q6N021 2002 aaPredicted RBP10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 HMX3A6NHT5 357 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 MSGN1A6NI15 193 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 CGB1A6NKQ9 187 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 AP4M1O00189 453 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 ACTL6BO94805 426 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 HLA-AP01891 365 aaKnown RBP10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 P0C879 139 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 ANXA3P12429 323 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 HLA-GP17693 338 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 COMPP49747 757 aaPredicted RBP10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 RPL8P62917 257 aaKnown RBP10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 DHRS2Q13268 280 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 DCTN2Q13561 401 aaKnown RBP10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 UNQ5815/PRO19632Q6UWF5 114 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 C12orf54Q6X4T0 127 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 Q6ZRM9 215 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 LGI3Q8N145 548 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 LFNGQ8NES3 379 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 OR4A5Q8NH83 315 aa10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 SRSF12Q8WXF0 261 aaKnown RBP10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 FYTTD1Q96QD9 318 aaKnown RBP10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 QTRT1Q9BXR0 403 aaKnown RBP10.42□□□□□ -0.74
PDLIM7-212ENST00000504380 TRAV41A0A0B4J266 112 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 A0A0B4J293 547 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 TEX50A0A1B0GTY4 177 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 PSMB11A5LHX3 300 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 SNAPC5O75971 98 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 IGF1P05019 195 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 HOXB5P09067 269 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 CD28P10747 220 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 RPL27AP46776 148 aaKnown RBP10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 SPINK9Q5DT21 86 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 ASPHD1Q5U4P2 390 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 LCNL1Q6ZST4 164 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 OR5T1Q8NG75 326 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 OR5AU1Q8NGC0 362 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 SGMS2Q8NHU3 365 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 WFDC12Q8WWY7 111 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 RRNAD1Q96FB5 475 aaKnown RBP10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 PHB2Q99623 299 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 HINT2Q9BX68 163 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 OR51B2Q9Y5P1 312 aa10.41□□□□□ -0.74
PDLIM7-212ENST00000504380 A0A1B0GUS0 222 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 A0A1W2PN81 502 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 INMT-MINDY4F8WBC2 141 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 CREBL2O60519 120 aaPredicted RBP10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 ADAP1O75689 374 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 ATG12O94817 140 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 NXPH3O95157 252 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 VDAC1P21796 283 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 CHRNA7P36544 502 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 C19orf54Q5BKX5 351 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 PLET1Q6UQ28 207 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 C19orf35Q6ZS72 473 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 OR10W1Q8NGF6 305 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 OR4A16Q8NH70 328 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 WIPF2Q8TF74 440 aaPredicted RBP10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 CHPT1Q8WUD6 406 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 IL22RA2Q969J5 263 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 ALX4Q9H161 411 aaPredicted RBP10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 PALMDQ9NP74 551 aa10.4□□□□□ -0.74
PDLIM7-212ENST00000504380 C15orf61A6NNL5 157 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 TEX22C9J3V5 150 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 SOX15O60248 233 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 RBMXL2O75526 392 aaKnown RBP10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 DUS4LO95620 317 aaKnown RBP10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 REG1AP05451 166 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 AREGP15514 252 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 PPIFP30405 207 aaKnown RBP10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 MAS1LP35410 378 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 MECP2P51608 486 aaKnown RBP10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 CRIP2P52943 208 aaPredicted RBP10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 CFHR3Q02985 330 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 TCTEX1D4Q5JR98 221 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 C3orf56Q8N813 242 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 UXS1Q8NBZ7 420 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 ZNF431Q8TF32 576 aaPredicted RBP10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 COMMD5Q9GZQ3 224 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 CACNG5Q9UF02 275 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 PRNDQ9UKY0 176 aa10.39□□□□□ -0.75
PDLIM7-212ENST00000504380 A0A0B4J2A0 478 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 ST8SIA3O43173 380 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 PRH1P02810 166 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 SRPXP78539 464 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 DEFA5Q01523 94 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 NMSQ5H8A3 153 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 GGNBP1Q5YKI7 109 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 C11orf87Q6NUJ2 197 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 CADM3Q8N126 398 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 LRTM2Q8N967 370 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 MINDY2Q8NBR6 621 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 OR1L8Q8NGR8 309 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 COQ8AQ8NI60 647 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 LSM10Q969L4 123 aaKnown RBP10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 MS4A10Q96PG2 267 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 MARVELD1Q9BSK0 173 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 KLK15Q9H2R5 256 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 TMEM14BQ9NUH8 114 aa10.38□□□□□ -0.75
PDLIM7-212ENST00000504380 SHPKQ9UHJ6 478 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms