RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 IL22RA2Q969J5 263 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 RRNAD1Q96FB5 475 aaKnown RBP7.9□□□□□ -1.14
NUP54-203ENST00000504173 SEC22AQ96IW7 307 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 TMEM56Q96MV1 263 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 NOL4LQ96MY1 436 aaPredicted RBP7.9□□□□□ -1.14
NUP54-203ENST00000504173 LINC00527Q9UJ94 153 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 TMEM56-RWDD3S4R434 201 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 COL7A1Q02388 2944 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 TRAV3A0A0B4J244 114 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 PIGBOS1A0A0B4J2F0 54 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 PLXNB1O43157 2135 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 RBMXL2O75526 392 aaKnown RBP7.89□□□□□ -1.15
NUP54-203ENST00000504173 IGKV1-5P01602 117 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 IL6RP08887 468 aaPredicted RBP7.89□□□□□ -1.15
NUP54-203ENST00000504173 OR9G9P0C7N8 305 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 HLA-GP17693 338 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 VDAC1P21796 283 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 MAS1LP35410 378 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 PROK1P58294 105 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 OR2B8PP59922 312 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 DHRS2Q13268 280 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 ECSCRQ19T08 205 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 C10orf55Q5SWW7 151 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 CENPVQ7Z7K6 275 aaPredicted RBP7.89□□□□□ -1.15
NUP54-203ENST00000504173 LYG2Q86SG7 212 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 CADM3Q8N126 398 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 STPG2Q8N412 459 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 SLC35G3Q8N808 338 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 OR4A16Q8NH70 328 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 CHPT1Q8WUD6 406 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 SRSF12Q8WXF0 261 aaKnown RBP7.89□□□□□ -1.15
NUP54-203ENST00000504173 PHB2Q99623 299 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 FAM103A1Q9BTL3 118 aaKnown RBP7.89□□□□□ -1.15
NUP54-203ENST00000504173 ALX4Q9H161 411 aaPredicted RBP7.89□□□□□ -1.15
NUP54-203ENST00000504173 NSG2Q9Y328 171 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 WSB1Q9Y6I7 421 aa7.89□□□□□ -1.15
NUP54-203ENST00000504173 HYDINQ4G0P3 5121 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 TRAV41A0A0B4J266 112 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 PSMB11A5LHX3 300 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 INMT-MINDY4F8WBC2 141 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 PTTG1O95997 202 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 OPN1MWP04001 364 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 IGF1P05019 195 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 OPN1MW2P0DN77 364 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 OPN1MW3P0DN78 364 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 MYOD1P15172 320 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 RPL27AP46776 148 aaKnown RBP7.88□□□□□ -1.15
NUP54-203ENST00000504173 SLC35B1P78383 322 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 SSBP2P81877 361 aaPredicted RBP7.88□□□□□ -1.15
NUP54-203ENST00000504173 TMEM267Q0VDI3 215 aaPredicted RBP7.88□□□□□ -1.15
NUP54-203ENST00000504173 IZUMO4Q1ZYL8 232 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 ANKRD55Q3KP44 614 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 UNQ5815/PRO19632Q6UWF5 114 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 FAM219AQ8IW50 185 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 OR52B4Q8NGK2 314 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 COQ8AQ8NI60 647 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 FYTTD1Q96QD9 318 aaKnown RBP7.88□□□□□ -1.15
NUP54-203ENST00000504173 GON7Q9BXV9 100 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 COMMD5Q9GZQ3 224 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 WNT10AQ9GZT5 417 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 FKBP11Q9NYL4 201 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 PRNDQ9UKY0 176 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 FBXO7Q9Y3I1 522 aa7.88□□□□□ -1.15
NUP54-203ENST00000504173 DYNC2H1Q8NCM8 4307 aaKnown RBP7.88□□□□□ -1.15
NUP54-203ENST00000504173 TNCP24821 2201 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 A0A0B4J2A0 478 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 A0A0G2JRQ6 117 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 DUXBA0A1W2PPF3 345 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 MSGN1A6NI15 193 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 C15orf61A6NNL5 157 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 G3V318 75 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 DUS4LO95620 317 aaKnown RBP7.87□□□□□ -1.15
NUP54-203ENST00000504173 FGF2P09038 288 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 P0C879 139 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 APELAP0DMC3 54 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 EGR2P11161 476 aaPredicted RBP7.87□□□□□ -1.15
NUP54-203ENST00000504173 SPNP16150 400 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 MECP2P51608 486 aaKnown RBP7.87□□□□□ -1.15
NUP54-203ENST00000504173 RGS21Q2M5E4 152 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 LYZL2Q7Z4W2 148 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 ZNF329Q86UD4 541 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 LRTM2Q8N967 370 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 LFNGQ8NES3 379 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 WFDC12Q8WWY7 111 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 LSM10Q969L4 123 aaKnown RBP7.87□□□□□ -1.15
NUP54-203ENST00000504173 SPIN2AQ99865 258 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 SPIN2BQ9BPZ2 258 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 SEC22CQ9BRL7 303 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 TMEM14BQ9NUH8 114 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 CACNG5Q9UF02 275 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 SHPKQ9UHJ6 478 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 ZNF580Q9UK33 172 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 OR51B2Q9Y5P1 312 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 PCLOQ9Y6V0 5065 aa7.87□□□□□ -1.15
NUP54-203ENST00000504173 A0A0B4J293 547 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 A0A1W2PN81 502 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 PRAF2O60831 178 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 DHFRP00374 187 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 IL5P05113 134 aa7.86□□□□□ -1.15
NUP54-203ENST00000504173 HOXB5P09067 269 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms