RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 A0A1B0GVT2 93 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 H3BMG7 143 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 BRI3O95415 125 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 ITGBL1O95965 494 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 PRSS1P07477 247 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 RPS18P62269 152 aaKnown RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 YBX1P67809 324 aaKnown RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 TCF23Q7RTU1 214 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 PELI3Q8N2H9 469 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 VWCEQ96DN2 955 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 ZMAT4Q9H898 229 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 LRRC37AA6NMS7 1700 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 CCL21O00585 134 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 PIRTP0C851 137 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 SNRPGP62308 76 aaKnown RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 DMKNQ6E0U4 476 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 APOBEC4Q8WW27 367 aaKnown RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 RPP25Q9BUL9 199 aaKnown RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 PHPT1Q9NRX4 125 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 GPX2P18283 190 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 POLR2LP62875 67 aaKnown RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 FOXI1Q12951 378 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 CENPWQ5EE01 88 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 LY6G5BQ8NDX9 201 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 TMEM255BQ8WV15 326 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 TMEM242Q9NWH2 141 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 A0A0U1RQF3 1178 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 CRYGBP07316 175 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 SLURP2P0DP57 97 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 FGF6P10767 208 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 TBR1Q16650 682 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 SPTSSAQ969W0 71 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 SCARF2Q96GP6 870 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 C3orf79P0CE67 100 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 SGSHP51688 502 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 CD164Q04900 197 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 SLC22A24Q8N4F4 322 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 MCHR1Q99705 422 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 MTFP1Q9UDX5 166 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 TIMP1P01033 207 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 SRP19P09132 144 aaKnown RBP5.28□□□□□ -1.56
CLCN3-204ENST00000504131 DANCRP0C864 163 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 SSBP1Q04837 148 aaKnown RBP5.28□□□□□ -1.56
CLCN3-204ENST00000504131 C5orf24Q7Z6I8 188 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 HDHD3Q9BSH5 251 aaPredicted RBP5.28□□□□□ -1.56
CLCN3-204ENST00000504131 DNAJC15Q9Y5T4 150 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 COL2A1P02458 1487 aaPredicted RBP5.28□□□□□ -1.56
CLCN3-204ENST00000504131 IGLV3-22A0A075B6J6 115 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 hDV102S1A0JD36 115 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 AMY1AP04745 511 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 CXCL5P42830 114 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 ERVK11-1P61568 191 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 OR1C1Q15619 314 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 Q6ZWC4 215 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 TMEM54Q969K7 222 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 C16orf92Q96LL3 132 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 FOXB1Q99853 325 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 SLC25A14O95258 325 aaPredicted RBP5.28□□□□□ -1.56
CLCN3-204ENST00000504131 PCOLCEQ15113 449 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 TMEM91Q6ZNR0 172 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 TMEM179BQ7Z7N9 219 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 BCL6BQ8N143 479 aaPredicted RBP5.28□□□□□ -1.56
CLCN3-204ENST00000504131 APCDD1LQ8NCL9 501 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 BADQ92934 168 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 ECM29Q5VYK3 1845 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 BRWD3Q6RI45 1802 aa5.28□□□□□ -1.56
CLCN3-204ENST00000504131 RBMY1BA6NDE4 496 aaKnown RBP5.27□□□□□ -1.57
CLCN3-204ENST00000504131 RBMY1EA6NEQ0 496 aaKnown RBP5.27□□□□□ -1.57
CLCN3-204ENST00000504131 NDUFC2-KCTD14E9PQ53 114 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 C1QL1O75973 258 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 KBTBD11O94819 623 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 RBMY1DP0C7P1 496 aaKnown RBP5.27□□□□□ -1.57
CLCN3-204ENST00000504131 RBMY1A1P0DJD3 496 aaKnown RBP5.27□□□□□ -1.57
CLCN3-204ENST00000504131 GZMMP51124 257 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 WNT3AP56704 352 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 FOXC1Q12948 553 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 STPG3Q8N7X2 389 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 TMEM230Q96A57 120 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 C20orf78Q9BR46 151 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 CHCHD2Q9Y6H1 151 aaPredicted RBP5.27□□□□□ -1.57
CLCN3-204ENST00000504131 FAM157AC9JC47 383 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 SSSCA1O60232 199 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 IGHG4P01861 327 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 WFDC2Q14508 124 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.27□□□□□ -1.57
CLCN3-204ENST00000504131 MYOZ3Q8TDC0 251 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 UBE2E3Q969T4 207 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 AAMDCQ9H7C9 122 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 SPINT2O43291 252 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 CR2P20023 1033 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 TMEM50BP56557 158 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 PEAR1Q5VY43 1037 aaPredicted RBP5.27□□□□□ -1.57
CLCN3-204ENST00000504131 TDHQ8IZJ6 230 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 KIR3DL3Q8N743 410 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 KIR2DL4Q99706 377 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 TIAM2Q8IVF5 1701 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 PITX3O75364 302 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 TCRAP04437 139 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 RNF138Q8WVD3 245 aa5.27□□□□□ -1.57
CLCN3-204ENST00000504131 SSMEM1Q8WWF3 244 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms