RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PSMB8P28062 276 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 FOXE3Q13461 319 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 RBMS2Q15434 407 aaKnown RBP12.88□□□□□ -0.35
SCLT1-205ENST00000503401 IZUMO4Q1ZYL8 232 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 CXorf66Q5JRM2 361 aaPredicted RBP12.88□□□□□ -0.35
SCLT1-205ENST00000503401 NDUFA11Q86Y39 141 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 SGPP2Q8IWX5 399 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 COMMD1Q8N668 190 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 GLYATL2Q8WU03 294 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 SLC25A21Q9BQT8 299 aaPredicted RBP12.88□□□□□ -0.35
SCLT1-205ENST00000503401 FLVCR2Q9UPI3 526 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 TSSC4Q9Y5U2 329 aaPredicted RBP12.88□□□□□ -0.35
SCLT1-205ENST00000503401 LYRM1O43325 122 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 IGKV1-5P01602 117 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 ELANEP08246 267 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 RPL27AP46776 148 aaKnown RBP12.88□□□□□ -0.35
SCLT1-205ENST00000503401 OR2B8PP59922 312 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 SUPT4H1P63272 117 aaKnown RBP12.88□□□□□ -0.35
SCLT1-205ENST00000503401 LHFPL5Q8TAF8 219 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 MS4A10Q96PG2 267 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 C7orf50Q9BRJ6 194 aaKnown RBP12.88□□□□□ -0.35
SCLT1-205ENST00000503401 TMEM222Q9H0R3 208 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 DBX1A6NMT0 343 aa12.87□□□□□ -0.35
SCLT1-205ENST00000503401 M0QZ24 198 aa12.87□□□□□ -0.35
SCLT1-205ENST00000503401 MAS1LP35410 378 aa12.87□□□□□ -0.35
SCLT1-205ENST00000503401 AKR1C2P52895 323 aa12.87□□□□□ -0.35
SCLT1-205ENST00000503401 RPL23AP62750 156 aaKnown RBP12.87□□□□□ -0.35
SCLT1-205ENST00000503401 C2orf68Q2NKX9 166 aa12.87□□□□□ -0.35
SCLT1-205ENST00000503401 H2BFWTQ7Z2G1 175 aa12.87□□□□□ -0.35
SCLT1-205ENST00000503401 PALMDQ9NP74 551 aa12.87□□□□□ -0.35
SCLT1-205ENST00000503401 CGB1A6NKQ9 187 aa12.86□□□□□ -0.35
SCLT1-205ENST00000503401 TEX22C9J3V5 150 aa12.86□□□□□ -0.35
SCLT1-205ENST00000503401 NDUFB6O95139 128 aa12.86□□□□□ -0.35
SCLT1-205ENST00000503401 IFITM3Q01628 133 aa12.86□□□□□ -0.35
SCLT1-205ENST00000503401 TMEM65Q6PI78 240 aa12.86□□□□□ -0.35
SCLT1-205ENST00000503401 RNF152Q8N8N0 203 aa12.86□□□□□ -0.35
SCLT1-205ENST00000503401 SPIN2AQ99865 258 aa12.86□□□□□ -0.35
SCLT1-205ENST00000503401 SPIN2BQ9BPZ2 258 aa12.86□□□□□ -0.35
SCLT1-205ENST00000503401 COMMD5Q9GZQ3 224 aa12.86□□□□□ -0.35
SCLT1-205ENST00000503401 ZNF355PQ9NSJ1 428 aa12.86□□□□□ -0.35
SCLT1-205ENST00000503401 TBC1D24Q9ULP9 559 aa12.86□□□□□ -0.35
SCLT1-205ENST00000503401 B3GALNT1O75752 331 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 UPK1BO75841 260 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 SNAPC5O75971 98 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 CDS2O95674 445 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 RAB9AP51151 201 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 DEFA5Q01523 94 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 TMEM187Q14656 261 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 TMEM268Q5VZI3 342 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 C19orf35Q6ZS72 473 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 SELENOHQ8IZQ5 122 aaKnown RBP12.85□□□□□ -0.35
SCLT1-205ENST00000503401 CENPSQ8N2Z9 138 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 KLHL30-AS1Q8NEE0 82 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 OR5M8Q8NGP6 311 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 FAM110DQ8TAY7 271 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-205ENST00000503401 GALNT14Q96FL9 552 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 COA4Q9NYJ1 87 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 KCNIP3Q9Y2W7 256 aa12.85□□□□□ -0.35
SCLT1-205ENST00000503401 A0A0G2JRQ6 117 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 NUDT19A8MXV4 375 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 PRH1P02810 166 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 AREGP15514 252 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 VAMP1P23763 118 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 DHODHQ02127 395 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 DCTN2Q13561 401 aaKnown RBP12.84□□□□□ -0.35
SCLT1-205ENST00000503401 KIAA0141Q14154 515 aaPredicted RBP12.84□□□□□ -0.35
SCLT1-205ENST00000503401 TMEM128Q5BJH2 165 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 C8orf86Q6ZUL3 223 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 ZNF695Q8IW36 515 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 RNASE11Q8TAA1 199 aaKnown RBP12.84□□□□□ -0.35
SCLT1-205ENST00000503401 OR5B12Q96R08 314 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 ZFP57Q9NU63 452 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 OR51B2Q9Y5P1 312 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 TEX50A0A1B0GTY4 177 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 C15orf61A6NNL5 157 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 REG1AP05451 166 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 P0C879 139 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 TPPP2P59282 170 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 PPP1R1AQ13522 171 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 OR10W1Q8NGF6 305 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 OR4A16Q8NH70 328 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 MYOZ3Q8TDC0 251 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 RBPMSQ93062 196 aaKnown RBP12.84□□□□□ -0.35
SCLT1-205ENST00000503401 TMEM68Q96MH6 324 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 HINT2Q9BX68 163 aa12.84□□□□□ -0.35
SCLT1-205ENST00000503401 MGAM2Q2M2H8 2515 aa12.83□□□□□ -0.36
SCLT1-205ENST00000503401 RBMXL2O75526 392 aaKnown RBP12.83□□□□□ -0.36
SCLT1-205ENST00000503401 TRGV3P03979 118 aa12.83□□□□□ -0.36
SCLT1-205ENST00000503401 ANXA7P20073 488 aaKnown RBP12.83□□□□□ -0.36
SCLT1-205ENST00000503401 DEFB136Q30KP8 78 aa12.83□□□□□ -0.36
SCLT1-205ENST00000503401 SLC25A42Q86VD7 318 aa12.83□□□□□ -0.36
SCLT1-205ENST00000503401 CADM3Q8N126 398 aa12.83□□□□□ -0.36
SCLT1-205ENST00000503401 ZNF491Q8N8L2 437 aa12.83□□□□□ -0.36
SCLT1-205ENST00000503401 RRNAD1Q96FB5 475 aaKnown RBP12.83□□□□□ -0.36
SCLT1-205ENST00000503401 TMEM56Q96MV1 263 aa12.83□□□□□ -0.36
SCLT1-205ENST00000503401 DUX3Q96PT4 197 aa12.83□□□□□ -0.36
SCLT1-205ENST00000503401 QTRT1Q9BXR0 403 aaKnown RBP12.83□□□□□ -0.36
SCLT1-205ENST00000503401 GNB4Q9HAV0 340 aa12.83□□□□□ -0.36
SCLT1-205ENST00000503401 TMEM14BQ9NUH8 114 aa12.83□□□□□ -0.36
SCLT1-205ENST00000503401 PRNDQ9UKY0 176 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms