RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 COL4A3BPQ9Y5P4 624 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 ATP8B3O60423 1300 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 RALGAPA1Q6GYQ0 2036 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 IGHV4-28A0A0C4DH34 117 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 C15orf62A8K5M9 175 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 TLX2O43763 284 aaPredicted RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 IGSF6O95976 241 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 FABP1P07148 127 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 AGAP20933 346 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 CNN1P51911 297 aaKnown RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 POLR2JP52435 117 aaKnown RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 HERVK_113P61574 105 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 LSM3P62310 102 aaKnown RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 RPS6P62753 249 aaKnown RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 ADAM8P78325 824 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 PYCR3Q53H96 274 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 SFTPA2Q8IWL1 248 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 SFTPA1Q8IWL2 248 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 LYG1Q8N1E2 194 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 FAM24BQ8N5W8 94 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 YIPF7Q8N8F6 280 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 OR2M3Q8NG83 312 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 CLEC2BQ92478 149 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 NMD3Q96D46 503 aaKnown RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 KAZALD1Q96I82 304 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 LITAFQ99732 161 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 ZNF717Q9BY31 904 aaPredicted RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 TM6SF2Q9BZW4 377 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 WDR61Q9GZS3 305 aaKnown RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 CHST5Q9GZS9 411 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 HCFC1R1Q9NWW0 138 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 FBLN5Q9UBX5 448 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 VAX2Q9UIW0 290 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 LY96Q9Y6Y9 160 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 HERC1Q15751 4861 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 WDFY4Q6ZS81 3184 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 OBSCNQ5VST9 7968 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 A0A0D9SG52 128 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 CENPXA8MT69 81 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 FAM72CH0Y354 149 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 M0R2P5 195 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 PIN1P1O15428 100 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 IGHV3-13P01766 116 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 SNRNP70P08621 437 aaKnown RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 CT62P0C5K7 136 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 HERV-K104P61576 105 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 MFAP5Q13361 173 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 PKP1Q13835 747 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 KLK9Q2XQG4 91 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 LBHQ53QV2 105 aaPredicted RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 AKR1C8PQ5T2L2 129 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 FAM72AQ5TYM5 149 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 FRG2Q64ET8 278 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 FAM72DQ6L9T8 149 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 ZNF66Q6ZN08 573 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 C7orf65Q6ZTY9 151 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 FAM220AQ7Z4H9 259 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 FAM72BQ86X60 149 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 CENPLQ8N0S6 344 aaPredicted RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 EXOC3-AS1Q8N2X6 119 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 C3orf22Q8N5N4 141 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 YIPF5Q969M3 257 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 P2RY11Q96G91 374 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 FMC1Q96HJ9 113 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 MRGPRX1Q96LB2 322 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 EBPLQ9BY08 206 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 CXCL16Q9H2A7 254 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 AK9Q5TCS8 1911 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 IGSF9BQ9UPX0 1349 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 IGLV4-60A0A075B6I1 120 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 A0A0A0MQY5 61 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 TRAV12-3A0A0B4J271 114 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 P2RX6O15547 441 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 BCL2L11O43521 198 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 CTNSO60931 367 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 NDUFS7O75251 213 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 OR2H2O95918 312 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 IGLV2-23P01705 113 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 IGLV3-25P01717 112 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 SFTA3P0C7M3 94 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 MYL12AP19105 171 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 RFC3P40938 356 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 OR1D4P47884 311 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 TAS2R40P59535 323 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 IFITM3Q01628 133 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 FOXF1Q12946 379 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 C9orf129Q5T035 196 aaKnown RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 FKBP1CQ5VVH2 108 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 RAET1GQ6H3X3 334 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 RNASEKQ6P5S7 137 aaKnown RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 Q6ZSN1 163 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 LHFPL3Q86UP9 236 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 Q8N814 137 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 LINC00301Q8NCQ3 95 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 OR7G3Q8NG95 312 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 C19orf60Q96EN9 201 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 WDYHV1Q96HA8 205 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 MAP3K3Q99759 626 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 HSPB9Q9BQS6 159 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 NAA38Q9BRA0 125 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms