RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 RAB14P61106 215 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 OR2F1Q13607 317 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 PMAIP1Q13794 54 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 RGS21Q2M5E4 152 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 ZNF791Q3KP31 576 aaPredicted RBP1.58□□□□□ -2.16
SMC4-225ENST00000497203 C1orf158Q8N1D5 194 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 OR1M1Q8NGA1 313 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 OR52E6Q96RD3 313 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 VCX3BQ9H321 246 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 C8orf4Q9NR00 106 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 RBM7Q9Y580 266 aaKnown RBP1.58□□□□□ -2.16
SMC4-225ENST00000497203 WDR90Q96KV7 1748 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 MALRD1Q5VYJ5 2156 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 TRAV7A0A075B6U4 112 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 TRAV38-1A0A0B4J264 116 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 A0A1B0GVG6 124 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 H3BT86 120 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 H7C2G1 150 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 I3L521 148 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 NOS1APO75052 506 aaPredicted RBP1.57□□□□□ -2.16
SMC4-225ENST00000497203 IFNA16P05015 189 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 MSMBP08118 114 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 LGALS1P09382 135 aaKnown RBP1.57□□□□□ -2.16
SMC4-225ENST00000497203 MSNP26038 577 aaKnown RBP1.57□□□□□ -2.16
SMC4-225ENST00000497203 TMEM42Q69YG0 159 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 C8orf74Q6P047 294 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 DCXRQ7Z4W1 244 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 KTN1-AS1Q86SY8 53 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 LRRC28Q86X40 367 aaPredicted RBP1.57□□□□□ -2.16
SMC4-225ENST00000497203 DYNAPQ8N1N2 210 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 C10orf126Q8N4M7 172 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 OR51D1Q8NGF3 324 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 OR8J2Q8NGG1 315 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 SLC35B4Q969S0 331 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
SMC4-225ENST00000497203 PAQR5Q9NXK6 330 aaPredicted RBP1.57□□□□□ -2.16
SMC4-225ENST00000497203 RTTNQ86VV8 2226 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 FN1P02751 2386 aaKnown RBP1.56□□□□□ -2.16
SMC4-225ENST00000497203 IGHV1-18A0A0C4DH31 117 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 ZNF705FA8MVS1 300 aaPredicted RBP1.56□□□□□ -2.16
SMC4-225ENST00000497203 EEF1E1-BLOC1S5C9J1V9 151 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 LEPROTO15243 131 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 E2F6O75461 281 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 C1QAP02745 245 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 SERPINA7P05543 415 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 TFPTP0C1Z6 253 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 FGF6P10767 208 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 CD79AP11912 226 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 RPL28P46779 137 aaKnown RBP1.56□□□□□ -2.16
SMC4-225ENST00000497203 SPCS3P61009 180 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 ITGB3BPQ13352 177 aaPredicted RBP1.56□□□□□ -2.16
SMC4-225ENST00000497203 GRK1Q15835 563 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 RPP25LQ8N5L8 163 aaKnown RBP1.56□□□□□ -2.16
SMC4-225ENST00000497203 ACOT12Q8WYK0 555 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 ANKRD7Q92527 254 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 CHST6Q9GZX3 395 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 UBAP1Q9NZ09 502 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 NAT8Q9UHE5 227 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 MYO3BQ8WXR4 1341 aa1.56□□□□□ -2.16
SMC4-225ENST00000497203 SORL1Q92673 2214 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 MEIKINA0A087WXM9 373 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 HMSDA8MTL9 139 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 INMT-MINDY4F8WBC2 141 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 PSMD12O00232 456 aaPredicted RBP1.55□□□□□ -2.16
SMC4-225ENST00000497203 CCL5P13501 91 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 OMPP47874 163 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 PSME3P61289 254 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 SLC38A11Q08AI6 406 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 CCDC42Q96M95 316 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 PARD6GQ9BYG4 376 aaPredicted RBP1.55□□□□□ -2.16
SMC4-225ENST00000497203 DOK5Q9P104 306 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 VPS29Q9UBQ0 182 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 CRCT1Q9UGL9 99 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 FUT9Q9Y231 359 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 GREB1Q4ZG55 1949 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 NUMA1Q14980 2115 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 PLB1Q6P1J6 1458 aa1.55□□□□□ -2.16
SMC4-225ENST00000497203 CR1P17927 2039 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 TRBV20OR9-2A0A075B6H5 130 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 IRGMA1A4Y4 181 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 RPP14O95059 124 aaKnown RBP1.54□□□□□ -2.16
SMC4-225ENST00000497203 NAPSAO96009 420 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 SERPINA6P08185 405 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 SULT1A3P0DMM9 295 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 SULT1A4P0DMN0 295 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 NFYAP23511 347 aaPredicted RBP1.54□□□□□ -2.16
SMC4-225ENST00000497203 RPL18Q07020 188 aaKnown RBP1.54□□□□□ -2.16
SMC4-225ENST00000497203 C20orf196Q8IYI0 205 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 TMEM86AQ8N2M4 240 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 TMEM86BQ8N661 226 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 ZNF676Q8N7Q3 588 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 ERMAPQ96PL5 475 aaPredicted RBP1.54□□□□□ -2.16
SMC4-225ENST00000497203 EFCAB1Q9HAE3 211 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 RALGAPA2Q2PPJ7 1873 aa1.54□□□□□ -2.16
SMC4-225ENST00000497203 TGIF2-C20orf24A0A0A6YYL0 155 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 A0A0J9YY10 115 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 A0A1B0GX78 115 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 F8W036 122 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 SLC22A1O15245 554 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 PGLYRP1O75594 196 aaPredicted RBP1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms