RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TCRBV5S1A1TA0A578 114 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 TLCD2A6NGC4 264 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 ISLRO14498 428 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 OVOL1O14753 267 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 PROSCO94903 275 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 MT-ND6P03923 174 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 GABRG2P18507 467 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 OPRM1P35372 400 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 PPP1CAP62136 330 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 IHHQ14623 411 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 CEACAM16Q2WEN9 425 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 ANXA2RQ3ZCQ2 193 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 MPV17L2Q567V2 206 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 ASPHD1Q5U4P2 390 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 LCN12Q6JVE5 192 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 COMMD6Q7Z4G1 85 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 PRR22Q8IZ63 422 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 NPWQ8N729 165 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 PRR26Q8N8Z3 221 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 TEX45Q8NA69 505 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 OR10P1Q8NGE3 313 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 PIFOQ8TCI5 191 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 TVP23CQ96ET8 276 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF670Q9BS34 389 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 TMEM191AQ9H0A3 160 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 KCNIP2Q9NS61 270 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 OR5V1Q9UGF6 321 aa2.53□□□□□ -2.01
SNRNP48-202ENST00000496946 SCN9AQ15858 1988 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 TRAV14DV4A0A0A6YYC5 116 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 A0A0G2JK05 382 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 MUC21A0A0G2JKD1 596 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 MUC21A0A140T8X8 626 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 TCRBV9S1A1TA0A576 114 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 SRRM4A7MD48 611 aaKnown RBP2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF727A8MUV8 499 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 FAM220BPB1ANY3 271 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 J3QQQ9 107 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 M0R1B8 84 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 SLC17A2O00624 439 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 PGLYRP1O75594 196 aaPredicted RBP2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 HLA-DRB1P01911 266 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 LINC00869P0C866 280 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 FGF3P11487 239 aaPredicted RBP2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 EDNRAP25101 427 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 PFN2P35080 140 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 ATP4BP51164 291 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 RND3P61587 244 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 PPP1CBP62140 327 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 MUC21Q5SSG8 566 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 SSX8Q7RTT4 187 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 C10orf126Q8N4M7 172 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 C11orf45Q8TAV5 145 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 SCGB1C1Q8TD33 95 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 CT55Q8WUE5 264 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 IGFBPL1Q8WX77 278 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 GNPNAT1Q96EK6 184 aaPredicted RBP2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 PYGO2Q9BRQ0 406 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 TMEM59Q9BXS4 323 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 PBOV1Q9GZY1 135 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 AAMDCQ9H7C9 122 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF331Q9NQX6 463 aaPredicted RBP2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF581Q9P0T4 197 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF257Q9Y2Q1 563 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 SBF1O95248 1867 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 MYO5AQ9Y4I1 1855 aaKnown RBP2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 CCDC88CQ9P219 2028 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 EIF2AK4Q9P2K8 1649 aaKnown RBP2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 MYO10Q9HD67 2058 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 TNRC6AQ8NDV7 1962 aaKnown RBP2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 ASXL1Q8IXJ9 1541 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 TRBV20-1A0A075B6N2 111 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 A0A096LPK6 155 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 A0A0D9SFI3 127 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 FAM236AA0A1B0GUQ0 79 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 FAM236BA0A1B0GV22 79 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 FAM240AA0A1B0GVK7 77 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 A0A1W2PPM0 123 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 C5orf49A4QMS7 147 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 SOCS1O15524 211 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 ZFAND5O76080 213 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 NUDT14O95848 222 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 PTHP01270 115 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 P01737 135 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 CD58P19256 250 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 OPRK1P41145 380 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 CCR2P41597 374 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 CLDN17P56750 224 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 CD226Q15762 336 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 MPV17LQ2QL34 196 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF260Q3ZCT1 412 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 Q499Y3 187 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 C9orf153Q5TBE3 101 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 SLC35E4Q6ICL7 350 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 IGFL2Q6UWQ7 119 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 PRIMA1Q86XR5 153 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 ATOH7Q8N100 152 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 GAPTQ8N292 157 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 TMEM99Q8N816 258 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 OR4X2Q8NGF9 303 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 OR4K13Q8NH42 304 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms