RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 AMMECR1Q9Y4X0 333 aaPredicted RBP0.99□□□□□ -2.25
CD46-218ENST00000496723 RBM7Q9Y580 266 aaKnown RBP0.99□□□□□ -2.25
CD46-218ENST00000496723 CUL9Q8IWT3 2517 aa0.99□□□□□ -2.25
CD46-218ENST00000496723 A8MUN3 132 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 C21orf140B9A014 251 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 LST1O00453 97 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 PLA2G10O15496 165 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 KRT7P08729 469 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 KCNE1P15382 129 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 CCL1P22362 96 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 RPS12P25398 132 aaKnown RBP0.98□□□□□ -2.25
CD46-218ENST00000496723 MSNP26038 577 aaKnown RBP0.98□□□□□ -2.25
CD46-218ENST00000496723 CCR7P32248 378 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 MAP2K4P45985 399 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 RPL28P46779 137 aaKnown RBP0.98□□□□□ -2.25
CD46-218ENST00000496723 CSN1S1P47710 185 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 MARCKSL1P49006 195 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 NAA20P61599 178 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 POLR2GP62487 172 aaKnown RBP eCLIP0.98□□□□□ -2.25
CD46-218ENST00000496723 TMEM155Q4W5P6 130 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 CD200R1LQ6Q8B3 271 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 ZNF550Q7Z398 422 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 SGMS2Q8NHU3 365 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 RAB8BQ92930 207 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 ROPN1LQ96C74 230 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 MRPL32Q9BYC8 188 aaKnown RBP0.98□□□□□ -2.25
CD46-218ENST00000496723 MRPS26Q9BYN8 205 aaKnown RBP0.98□□□□□ -2.25
CD46-218ENST00000496723 RSL24D1Q9UHA3 163 aaKnown RBP0.98□□□□□ -2.25
CD46-218ENST00000496723 NAT8Q9UHE5 227 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 ANGPT4Q9Y264 503 aa0.98□□□□□ -2.25
CD46-218ENST00000496723 BAZ2BQ9UIF8 2168 aaKnown RBP0.98□□□□□ -2.25
CD46-218ENST00000496723 EVC2Q86UK5 1308 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 NOS1APO75052 506 aaPredicted RBP0.97□□□□□ -2.25
CD46-218ENST00000496723 DCTN3O75935 186 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 NSA2O95478 260 aaKnown RBP0.97□□□□□ -2.25
CD46-218ENST00000496723 PPBPP02775 128 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 ISG15P05161 165 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 SRP19P09132 144 aaKnown RBP0.97□□□□□ -2.25
CD46-218ENST00000496723 FAM228BP0C875 321 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 GPX2P18283 190 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 S100A7P31151 101 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 AKR1C3P42330 323 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 OR4D2P58180 307 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 TNFAIP6P98066 277 aaPredicted RBP0.97□□□□□ -2.25
CD46-218ENST00000496723 NDUFA5Q16718 116 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 ACSM3Q53FZ2 586 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 TNFAIP8L3Q5GJ75 292 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 COQ5Q5HYK3 327 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 GLT8D1Q68CQ7 371 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 RPS19BP1Q86WX3 136 aaKnown RBP0.97□□□□□ -2.25
CD46-218ENST00000496723 GID4Q8IVV7 300 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 C10orf67Q8IYJ2 551 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 DYNAPQ8N1N2 210 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 RPP25LQ8N5L8 163 aaKnown RBP0.97□□□□□ -2.25
CD46-218ENST00000496723 DEFB125Q8N687 156 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 OTUD6BQ8N6M0 293 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 GPR32P1Q8NGA4 272 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 DDI1Q8WTU0 396 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 ACOT12Q8WYK0 555 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 OPTNQ96CV9 577 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 LSM5Q9Y4Y9 91 aaKnown RBP0.97□□□□□ -2.25
CD46-218ENST00000496723 ANAPC1Q9H1A4 1944 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 SMARCA4P51532 1647 aa0.97□□□□□ -2.25
CD46-218ENST00000496723 A0A0D9SEW6 157 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 I3L521 148 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 LEPROTO15243 131 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 ORC5O43913 435 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 ZNF737O75373 536 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 CRPP02741 224 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 CALB1P05937 261 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 TFPTP0C1Z6 253 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 ZNF705DP0CH99 300 aaPredicted RBP0.96□□□□□ -2.26
CD46-218ENST00000496723 ZNF705BP0CI00 300 aaPredicted RBP0.96□□□□□ -2.26
CD46-218ENST00000496723 SULT1A3P0DMM9 295 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 SULT1A4P0DMN0 295 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 REG1BP48304 166 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 ELOBQ15370 118 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 CDKL4Q5MAI5 379 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 C7orf65Q6ZTY9 151 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 SLC36A1Q7Z2H8 476 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 MBD3L1Q8WWY6 194 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 ANKRD7Q92527 254 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 CNBD2Q96M20 576 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 CHST6Q9GZX3 395 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 PAQR5Q9NXK6 330 aaPredicted RBP0.96□□□□□ -2.26
CD46-218ENST00000496723 FUT9Q9Y231 359 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 SCAF11Q99590 1463 aaKnown RBP0.96□□□□□ -2.26
CD46-218ENST00000496723 DCCP43146 1447 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 RP1P56715 2156 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 STRCQ7RTU9 1775 aa0.96□□□□□ -2.26
CD46-218ENST00000496723 MICAL3Q7RTP6 2002 aa0.95□□□□□ -2.26
CD46-218ENST00000496723 TRBV6-5A0A0K0K1A5 114 aa0.95□□□□□ -2.26
CD46-218ENST00000496723 MEIS3P1A6NDR6 274 aa0.95□□□□□ -2.26
CD46-218ENST00000496723 EVPLLA8MZ36 301 aa0.95□□□□□ -2.26
CD46-218ENST00000496723 SLC22A1O15245 554 aa0.95□□□□□ -2.26
CD46-218ENST00000496723 CIAO1O76071 339 aa0.95□□□□□ -2.26
CD46-218ENST00000496723 ANGP03950 147 aaKnown RBP0.95□□□□□ -2.26
CD46-218ENST00000496723 TRGC1P0CF51 173 aa0.95□□□□□ -2.26
CD46-218ENST00000496723 FGF6P10767 208 aa0.95□□□□□ -2.26
CD46-218ENST00000496723 DEFA4P12838 97 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms