RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 TRIM63Q969Q1 353 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 FAM210AQ96ND0 272 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 RAB40CQ96S21 281 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 IGKV1-6A0A0C4DH72 117 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 C9orf170A2RU37 121 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 A6NDX4 124 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 UPK2O00526 184 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 S1PR2O95136 353 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 BCL6BQ8N143 479 aaPredicted RBP6.94□□□□□ -1.3
U2AF1-212ENST00000496462 ZNF383Q8NA42 475 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 DUSP18Q8NEJ0 188 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 GOSR2O14653 212 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 HLA-DRB1P01911 266 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 SAA1P0DJI8 122 aaPredicted RBP6.94□□□□□ -1.3
U2AF1-212ENST00000496462 ANXA7P20073 488 aaKnown RBP6.94□□□□□ -1.3
U2AF1-212ENST00000496462 PRSS8Q16651 343 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 Q56UQ5 140 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 OR4A47Q6IF82 309 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 TCF23Q7RTU1 214 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 NRARPQ7Z6K4 114 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 EEF1AKMT3Q96AZ1 226 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 CXorf58Q96LI9 332 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 C2orf50Q96LR7 162 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 CHIAQ9BZP6 476 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 CA2P00918 260 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 TRGV3P03979 118 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 ELANEP08246 267 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 HTR2BP41595 481 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 PPP1R1AQ13522 171 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 LHFPL1Q86WI0 220 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 PIP4P2Q8N4L2 257 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 SRSF12Q8WXF0 261 aaKnown RBP6.93□□□□□ -1.3
U2AF1-212ENST00000496462 BORCS7-ASMTA0A0B4J1R7 106 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 OR9G9P0C7N8 305 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 SLC6A1P30531 599 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 TPPP2P59282 170 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 KLF17Q5JT82 389 aaPredicted RBP6.93□□□□□ -1.3
U2AF1-212ENST00000496462 OR4F17Q8NGA8 305 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 OR4F4Q96R69 305 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 ELOVL1Q9BW60 279 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 ZNF257Q9Y2Q1 563 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 SIGLEC9Q9Y336 463 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 A0A1W2PPI3 338 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 DLX1P56177 255 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 DHRS2Q13268 280 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 GRAMD2BQ96HH9 432 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 TMEM231Q9H6L2 316 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 AKAP9Q99996 3911 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 NUPL2O15504 423 aaKnown RBP6.93□□□□□ -1.3
U2AF1-212ENST00000496462 AKR1C1Q04828 323 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 FAM106AQ4KMX7 169 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 TMEM230Q96A57 120 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 USMG5Q96IX5 58 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 VSIG4Q9Y279 399 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 WSB1Q9Y6I7 421 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 U3KQ87 197 aa6.93□□□□□ -1.3
U2AF1-212ENST00000496462 YLPM1P49750 1951 aaKnown RBP6.92□□□□□ -1.3
U2AF1-212ENST00000496462 MDFIC2A0A1B0GVS7 189 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 H3BUA1 57 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 NDUFA7O95182 113 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 AVPP01185 164 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 ZNF134P52741 427 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 EXOSC2Q13868 293 aaKnown RBP6.92□□□□□ -1.3
U2AF1-212ENST00000496462 ACSM6Q6P461 480 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 OR10P1Q8NGE3 313 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 OR4D10Q8NGI6 311 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 PINX1Q96BK5 328 aaKnown RBP6.92□□□□□ -1.3
U2AF1-212ENST00000496462 MISP3Q96FF7 219 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 ARPC5LQ9BPX5 153 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 TRAV30A0A087WSZ9 112 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 ZP3P21754 424 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 CX3CL1P78423 397 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 GGNBP1Q5YKI7 109 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 NPBQ8NG41 125 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 GINS3Q9BRX5 216 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 PRDM13Q9H4Q3 707 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 TMEM89A2RUT3 159 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 SLC25A6P12236 298 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 OPRK1P41145 380 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 RAP2BP61225 183 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 SHISA2Q6UWI4 295 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 OR5T1Q8NG75 326 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 OR5AU1Q8NGC0 362 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 DTD1Q8TEA8 209 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 OR4C12Q96R67 309 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 AGMATQ9BSE5 352 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 C5orf66Q9H5L9 145 aa6.92□□□□□ -1.3
U2AF1-212ENST00000496462 RAI1Q7Z5J4 1906 aaPredicted RBP6.92□□□□□ -1.3
U2AF1-212ENST00000496462 KIAA2026Q5HYC2 2103 aa6.91□□□□□ -1.3
U2AF1-212ENST00000496462 MSGN1A6NI15 193 aa6.91□□□□□ -1.3
U2AF1-212ENST00000496462 GNG7O60262 68 aa6.91□□□□□ -1.3
U2AF1-212ENST00000496462 YIF1AO95070 293 aa6.91□□□□□ -1.3
U2AF1-212ENST00000496462 MT-CO2P00403 227 aa6.91□□□□□ -1.3
U2AF1-212ENST00000496462 HKR1P10072 659 aa6.91□□□□□ -1.3
U2AF1-212ENST00000496462 MFAP4P55083 255 aa6.91□□□□□ -1.3
U2AF1-212ENST00000496462 OR2B8PP59922 312 aa6.91□□□□□ -1.3
U2AF1-212ENST00000496462 EIF5AL1Q6IS14 154 aaKnown RBP6.91□□□□□ -1.3
U2AF1-212ENST00000496462 SELENOHQ8IZQ5 122 aaKnown RBP6.91□□□□□ -1.3
U2AF1-212ENST00000496462 SEC22CQ9BRL7 303 aa6.91□□□□□ -1.3
U2AF1-212ENST00000496462 PARP12Q9H0J9 701 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms