RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 ACOT13Q9NPJ3 140 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 TMEM14AQ9Y6G1 99 aa7.06□□□□□ -1.28
SMARCAL1-213ENST00000496037 IGKV1-12A0A0C4DH73 117 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 C2orf70A6NJV1 201 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 RRHO14718 337 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 IGKV1D-12P01611 117 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 C1QBP02746 253 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 MT-ND2P03891 347 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 MAP2K4P45985 399 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 LINC00205P59089 165 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 B2MP61769 119 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 LSM3P62310 102 aaKnown RBP7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 DEFA5Q01523 94 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 PAX5Q02548 391 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 GAGE2BQ13066 116 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 GAGE2EQ4V326 116 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 ZNF57Q68EA5 555 aaPredicted RBP7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 GAGE2AQ6NT46 116 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 SIGLEC15Q6ZMC9 328 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 OR5D18Q8NGL1 313 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 PLPPR1Q8TBJ4 325 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 TEX47Q8TBZ9 253 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 PP6455Q8WZ26 134 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 RFKQ969G6 155 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 MRPL20Q9BYC9 149 aaKnown RBP7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 GNG12Q9UBI6 72 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 GAGE2DQ9UEU5 116 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 GAB2Q9UQC2 676 aa7.05□□□□□ -1.28
SMARCAL1-213ENST00000496037 TRAV6A0A075B6T7 132 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 TRAV24A0A0B4J272 114 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 CCDC182A6NF36 153 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 PRR32B1ATL7 298 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 FCN1O00602 326 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 GNGT2O14610 69 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 SRSF10O75494 262 aaKnown RBP7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 FADS2O95864 444 aaKnown RBP7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 IFNA10P01566 189 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 MRPL3P09001 348 aaKnown RBP7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 RPL35AP18077 110 aaKnown RBP7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 ASAH1Q13510 395 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 CDK5R1Q15078 307 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 SLC35D3Q5M8T2 416 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 UBE2DNLQ8IWF7 75 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 IQCF1Q8N6M8 205 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 AQP11Q8NBQ7 271 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 ZNF439Q8NDP4 499 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 CCDC54Q8NEL0 328 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 OR5T1Q8NG75 326 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 OR10V1Q8NGI7 309 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 OR1L6Q8NGR2 347 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 DEDD2Q8WXF8 326 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 C10orf35Q96D05 121 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 USMG5Q96IX5 58 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 OPALINQ96PE5 141 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 CLCC1Q96S66 551 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 CHRDL1Q9BU40 450 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 RNF126Q9BV68 326 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 RAB9BQ9NP90 201 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 SELENOKQ9Y6D0 94 aa7.04□□□□□ -1.28
SMARCAL1-213ENST00000496037 TRAV26-1A0A087WT03 109 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 TRAV10A0A0B4J240 114 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 TMEM30CPA0ZSE6 113 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 C15orf65H3BRN8 121 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 CHEK1O14757 476 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 CA2P00918 260 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 CST1P01037 141 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 FABP3P05413 133 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 STAG3L2P0CL84 134 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 LGALS7P47929 136 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 MICAQ29983 383 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 CT45A1Q5HYN5 189 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 ZNF562Q6V9R5 426 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 Q6ZR54 194 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 SAXO1Q8IYX7 474 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 STX19Q8N4C7 294 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 OR4C5Q8NGB2 326 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 OR11H2Q8NH07 326 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 CT45A3Q8NHU0 189 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 KCNG3Q8TAE7 436 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 CNIH3Q8TBE1 160 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 GLYATL2Q8WU03 294 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 PARP12Q9H0J9 701 aaKnown RBP7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 PLCXD1Q9NUJ7 323 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 TBC1D24Q9ULP9 559 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 GMPPBQ9Y5P6 360 aa7.03□□□□□ -1.28
SMARCAL1-213ENST00000496037 IGKV1-9A0A0C4DH69 117 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 H3BN98 237 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 LGALS9O00182 355 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 BMPR1BO00238 502 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 DEFB4AO15263 64 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 ORC5O43913 435 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 CCNB2O95067 398 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 AMBPP02760 352 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 SCTP09683 121 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 ATF1P18846 271 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 GADD45AP24522 165 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 MYL9P24844 172 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 UCP1P25874 307 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 MAGEA2P43356 314 aa7.02□□□□□ -1.29
SMARCAL1-213ENST00000496037 S100A12P80511 92 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms