RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 SPCS2Q15005 226 aa13.2□□□□□ -0.3
CTNS-207ENST00000495445 LPCAT3Q6P1A2 487 aa13.2□□□□□ -0.3
CTNS-207ENST00000495445 CMTM1Q8IZ96 169 aa13.2□□□□□ -0.3
CTNS-207ENST00000495445 OR6Q1Q8NGQ2 317 aa13.2□□□□□ -0.3
CTNS-207ENST00000495445 FYTTD1Q96QD9 318 aaKnown RBP13.2□□□□□ -0.3
CTNS-207ENST00000495445 ABHD1Q96SE0 405 aa13.2□□□□□ -0.3
CTNS-207ENST00000495445 FAM212BQ9NTI7 297 aaPredicted RBP13.2□□□□□ -0.3
CTNS-207ENST00000495445 SIGLEC8Q9NYZ4 499 aa13.2□□□□□ -0.3
CTNS-207ENST00000495445 KLK11Q9UBX7 282 aa13.2□□□□□ -0.3
CTNS-207ENST00000495445 BMPR1BO00238 502 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 OR2J3O76001 311 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 RLN1P04808 185 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 AREGP15514 252 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 TSPAN5P62079 268 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 CD69Q07108 199 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 C19orf35Q6ZS72 473 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 OR9G4Q8NGQ1 327 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 OR52I2Q8NH67 350 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 FCAMRQ8WWV6 532 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 SRSF8Q9BRL6 282 aaKnown RBP13.19□□□□□ -0.3
CTNS-207ENST00000495445 HRASLSQ9HDD0 168 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 TMEM140Q9NV12 185 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 MTFP1Q9UDX5 166 aa13.19□□□□□ -0.3
CTNS-207ENST00000495445 GP9P14770 177 aa13.18□□□□□ -0.3
CTNS-207ENST00000495445 LPAR6P43657 344 aa13.18□□□□□ -0.3
CTNS-207ENST00000495445 MECP2P51608 486 aaKnown RBP13.18□□□□□ -0.3
CTNS-207ENST00000495445 TMBIM6P55061 237 aa13.18□□□□□ -0.3
CTNS-207ENST00000495445 SYNJ2BPP57105 145 aa13.18□□□□□ -0.3
CTNS-207ENST00000495445 EXOSC2Q13868 293 aaKnown RBP13.18□□□□□ -0.3
CTNS-207ENST00000495445 C15orf32Q32M92 178 aa13.18□□□□□ -0.3
CTNS-207ENST00000495445 FAM209BQ5JX69 171 aa13.18□□□□□ -0.3
CTNS-207ENST00000495445 C15orf40Q8WUR7 153 aa13.18□□□□□ -0.3
CTNS-207ENST00000495445 BCL7BQ9BQE9 202 aa13.18□□□□□ -0.3
CTNS-207ENST00000495445 EXTL2Q9UBQ6 330 aa13.18□□□□□ -0.3
CTNS-207ENST00000495445 TEX50A0A1B0GTY4 177 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 IGLC7A0M8Q6 106 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 DPPA5A6NC42 116 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 MARCH11A6NNE9 402 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 CTDSP2O14595 271 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 NDUFB8O95169 186 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 CSN3P07498 182 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 NHLRC4P0CG21 123 aaPredicted RBP13.17□□□□□ -0.3
CTNS-207ENST00000495445 PTBP1P26599 531 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTNS-207ENST00000495445 TATDN3Q17R31 274 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 RPEL1Q2QD12 228 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 LHFPL1Q86WI0 220 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 CLVS1Q8IUQ0 354 aaPredicted RBP13.17□□□□□ -0.3
CTNS-207ENST00000495445 DMBX1Q8NFW5 382 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 DYNC2LI1Q8TCX1 351 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 RAB2BQ8WUD1 216 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 FBXL7Q9UJT9 491 aa13.17□□□□□ -0.3
CTNS-207ENST00000495445 DNAH7Q8WXX0 4024 aa13.16□□□□□ -0.3
CTNS-207ENST00000495445 IGLV11-55A0A075B6I3 123 aa13.16□□□□□ -0.3
CTNS-207ENST00000495445 M0QYG6 137 aa13.16□□□□□ -0.3
CTNS-207ENST00000495445 LY86O95711 162 aa13.16□□□□□ -0.3
CTNS-207ENST00000495445 DHFRP00374 187 aa13.16□□□□□ -0.3
CTNS-207ENST00000495445 HIST1H1BP16401 226 aaKnown RBP13.16□□□□□ -0.3
CTNS-207ENST00000495445 C11orf87Q6NUJ2 197 aa13.16□□□□□ -0.3
CTNS-207ENST00000495445 SLC38A6Q8IZM9 456 aa13.16□□□□□ -0.3
CTNS-207ENST00000495445 COMMD5Q9GZQ3 224 aa13.16□□□□□ -0.3
CTNS-207ENST00000495445 NDUFA4L2Q9NRX3 87 aa13.16□□□□□ -0.3
CTNS-207ENST00000495445 SMAD5-AS1Q9Y6J3 95 aa13.16□□□□□ -0.3
CTNS-207ENST00000495445 KRASP01116 189 aa13.15□□□□□ -0.3
CTNS-207ENST00000495445 CD74P04233 296 aa13.15□□□□□ -0.3
CTNS-207ENST00000495445 CD3DP04234 171 aa13.15□□□□□ -0.3
CTNS-207ENST00000495445 RPA2P15927 270 aa13.15□□□□□ -0.3
CTNS-207ENST00000495445 TBPP20226 339 aa13.15□□□□□ -0.3
CTNS-207ENST00000495445 RPL5P46777 297 aaKnown RBP13.15□□□□□ -0.3
CTNS-207ENST00000495445 PHLDA2Q53GA4 152 aa13.15□□□□□ -0.3
CTNS-207ENST00000495445 THOC7Q6I9Y2 204 aaKnown RBP13.15□□□□□ -0.3
CTNS-207ENST00000495445 TBC1D26Q86UD7 250 aa13.15□□□□□ -0.3
CTNS-207ENST00000495445 Q8N1Y9 231 aa13.15□□□□□ -0.3
CTNS-207ENST00000495445 QTRT1Q9BXR0 403 aaKnown RBP13.15□□□□□ -0.3
CTNS-207ENST00000495445 IGKV1-39P01597 117 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 IGKV1D-39P04432 117 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 REG1AP05451 166 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 TRAPPC2P0DI81 140 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 TRAPPC2BP0DI82 140 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 G6PCP35575 357 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 ERVK-16P61578 105 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 RND3P61587 244 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 SSBP1Q04837 148 aaKnown RBP13.14□□□□□ -0.31
CTNS-207ENST00000495445 ADAMTSL5Q6ZMM2 481 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 HAPLN4Q86UW8 402 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 GPHB5Q86YW7 130 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 LAX1Q8IWV1 398 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 ARRDC1Q8N5I2 433 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 TMEM229BQ8NBD8 167 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 OR10W1Q8NGF6 305 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 OR1L8Q8NGR8 309 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 CCDC140Q96MF4 163 aa13.14□□□□□ -0.31
CTNS-207ENST00000495445 CCDC59Q9P031 241 aaKnown RBP13.14□□□□□ -0.31
CTNS-207ENST00000495445 PPP5D1E7EU14 171 aa13.13□□□□□ -0.31
CTNS-207ENST00000495445 GABARAPH6UMI1 98 aa13.13□□□□□ -0.31
CTNS-207ENST00000495445 GGCTO75223 188 aaKnown RBP13.13□□□□□ -0.31
CTNS-207ENST00000495445 SERPINE2P07093 398 aa13.13□□□□□ -0.31
CTNS-207ENST00000495445 DEFA4P12838 97 aa13.13□□□□□ -0.31
CTNS-207ENST00000495445 S100GP29377 79 aa13.13□□□□□ -0.31
CTNS-207ENST00000495445 WT1-ASQ06250 92 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms